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13_1_20cm_full_scaffold_1549

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1549_1
unknown

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comp(8..247)
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

13_1_20cm_full_scaffold_1549_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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332..721
-----------------
DNA (390bp)
protein (130aa)
50S ribosomal protein L7Ae n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=RL7A_HYPBU
50S ribosomal protein L7Ae; K02936 large subunit ribosomal protein L7Ae Tax=RBG_13_Bathyarchaeota_38_9_curated
rpl7ae; 50S ribosomal protein L7Ae
13_1_20cm_full_scaffold_1549_3
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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718..942
-----------------
DNA (225bp)
protein (75aa)
30S ribosomal protein S28e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IIL4_NITGG
30S ribosomal protein S28e; K02979 small subunit ribosomal protein S28e Tax=RBG_13_Bathyarchaeota_38_9_curated
rps28e; 30S ribosomal protein S28e
13_1_20cm_full_scaffold_1549_4
unknown

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comp(1120..1455)
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

13_1_20cm_full_scaffold_1549_5
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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1605..3383
-----------------
DNA (1779bp)
protein (593aa)
Probable translation initiation factor IF-2 n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=IF2P_IGNH4 rbh
translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=RBG_13_Bathyarchaeota_38_9_curated
translation initiation factor IF-2
13_1_20cm_full_scaffold_1549_6
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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3446..3823
-----------------
DNA (378bp)
protein (126aa)
30S ribosomal protein S6e n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS6E_METKA
RPS6A; 30S ribosomal protein S6; K02991 small subunit ribosomal protein S6e Tax=RBG_16_Bathyarchaeota_48_13_curated
RPS6A; 30S ribosomal protein S6
13_1_20cm_full_scaffold_1549_7
RBG_16_Archaea_50_20_curated, Archaea

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3820..4368
-----------------
DNA (549bp)
protein (183aa)
Ribonuclease, Rne/Rng family n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A2X7_PELCD
30S ribosomal protein S24e; K02974 small subunit ribosomal protein S24e Tax=RBG_16_Archaea_50_20_curated
ribonuclease, Rne/Rng family
13_1_20cm_full_scaffold_1549_8
RBG_16_Archaea_50_20_curated, Archaea

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comp(4676..5878)
-----------------
DNA (1203bp)
protein (401aa)
Translation-associated GTPase n=1 Tax=Thermofilum sp. 1910b RepID=S5ZE34_9CREN rbh
GTP binding protein Tax=RBG_16_Archaea_50_20_curated
GTP-binding and nucleic acid-binding protein YchF
13_1_20cm_full_scaffold_1549_9
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(5892..6506)
-----------------
DNA (615bp)
protein (205aa)
Predicted dinucleotide-binding enzyme n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TYQ9_METKA
dinucleotide-binding protein; K06988 Tax=RBG_16_Archaea_50_20_curated
dinucleotide-binding protein
13_1_20cm_full_scaffold_1549_10
RBG_16_Archaea_50_20_curated, Archaea

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comp(6560..7933)
-----------------
DNA (1374bp)
protein (458aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036E07C3
NADP-dependent malic enzyme Tax=RBG_16_Archaea_50_20_curated
NADP-dependent malic enzyme
13_1_20cm_full_scaffold_1549_11
RBG_16_Archaea_50_20_curated, Archaea

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8153..8551
-----------------
DNA (399bp)
protein (133aa)
50S ribosomal protein L15e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IDZ5_NITGG
50S ribosomal protein L15e; K02877 large subunit ribosomal protein L15e Tax=RBG_16_Archaea_50_20_curated
rpl15e; 50S ribosomal protein L15e
13_1_20cm_full_scaffold_1549_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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8593..9603
-----------------
DNA (1011bp)
protein (337aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZVR1_9CREN
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_20cm_full_scaffold_1549_13
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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comp(9566..10396)
-----------------
DNA (831bp)
protein (277aa)
Isopentenyl phosphate kinase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7A6_METSW
hypothetical protein; K06981 Tax=RBG_16_Bathyarchaeota_57_9_curated
aspartate/glutamate/uridylate kinase
13_1_20cm_full_scaffold_1549_14
unknown

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10475..10741
-----------------
DNA (267bp)
protein (89aa)

This feature has no annotations

13_1_20cm_full_scaffold_1549_15
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

10741..11481
-----------------
DNA (741bp)
protein (247aa)
ATPase, RecA superfamily n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JDP8_THEKO
circadian clock protein KaiC Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_20cm_full_scaffold_1549_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

11550..12587
-----------------
DNA (1038bp)
protein (346aa)
Universally conserved protein n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKD6_HYPBU
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
recombinase RecA
13_1_20cm_full_scaffold_1549_17
RBG_16_Archaea_50_20_curated, Archaea

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comp(12593..13357)
-----------------
DNA (765bp)
protein (255aa)
Hypothetical conserved protein n=1 Tax=uncultured crenarchaeote RepID=H5SJ42_9CREN
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
putative circadian clock protein, KaiC
13_1_20cm_full_scaffold_1549_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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13509..14519
-----------------
DNA (1011bp)
protein (337aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH89_NITGG
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_20cm_full_scaffold_1549_19
unknown

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14593..14790
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

13_1_20cm_full_scaffold_1549_20
unknown

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14847..15980
-----------------
DNA (1134bp)
protein (378aa)

This feature has no annotations

Displaying 20 items

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