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13_1_20cm_full_scaffold_7067

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_7067_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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1..126
DNA (126bp) protein (42aa)
bNR repeat protein (fragment) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_20cm_full_scaffold_7067_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(806..1729)
DNA (924bp) protein (308aa)
lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138
UDP-3-O-acyl N-acetylglucosamine deacetylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9N9_9BACT rbh
13_1_20cm_full_scaffold_7067_3
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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comp(1941..2612)
DNA (672bp) protein (224aa)
Transcriptional regulator, LuxR family n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9P0_9BACT rbh
LuxR family transcriptional regulator Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
LuxR family transcriptional regulator
13_1_20cm_full_scaffold_7067_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(2581..3702)
DNA (1122bp) protein (374aa)
putative histidine kinase; K07777 two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Putative Histidine kinase with N-terminal NAD-binding region n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9P1_9BACT rbh
putative histidine kinase
13_1_20cm_full_scaffold_7067_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3775..4194)
DNA (420bp) protein (140aa)
Transcriptional repressor NrdR n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9P2_9BACT
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nrdR; transcriptional regulator NrdR
13_1_20cm_full_scaffold_7067_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4263..5510)
DNA (1248bp) protein (416aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9P3_9BACT
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBK39952.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};
13_1_20cm_full_scaffold_7067_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


comp(5518..6000)
DNA (483bp) protein (161aa)
50S ribosomal protein L9 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9P4_9BACT
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rplI; 50S ribosomal protein L9
13_1_20cm_full_scaffold_7067_8
unknown

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6106..6540
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_20cm_full_scaffold_7067_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

6537..7790
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9P5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK39954.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_20cm_full_scaffold_7067_10
unknown

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comp(7861..8604)
DNA (744bp) protein (248aa)

This feature has no annotations

Displaying 10 items

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