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13_1_20cm_full_scaffold_2499_6

Organism: 13_1_20CM_Rokubacteria_70_15

partial RP 4 / 55 BSCG 2 / 51 ASCG 0 / 38
Location: 5595..7088

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=2 Tax=Acidobacterium capsulatum RepID=C1F1D9_ACIC5 similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 523.0
  • Bit_score: 404
  • Evalue 1.40e-109
rpoD; RNA polymerase sigma factor rpoD; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 499.0
  • Bit_score: 753
  • Evalue 2.30e-214
rpoD; RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 523.0
  • Bit_score: 404
  • Evalue 4.10e-110

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1494
ATGACATTCAGGGAAGGTACTCGCGAAGTCGATGCCGGGGCCACGGCTGCCGCTCCGGGCGCGGTCACCAGCCCCGAAGAGCCCGAGACGCCCGTCGCCCTCGGAGAGGAACCCGAGGACACCCCGCGACCCGAACCCCTGGAGGCCGGCGCGGCTCCGCGTGGTGAGGATCCGGTCCGCCTCTATCTCAAGGAGATCGGCAAGGTCCACCTGCTGACCGCCGCCCAAGAGGTCCAAATCGGTCGTCGAATCGAGGTGGGCCAGATCGCGCTCCGCCGCACGCTGGCCGGCATCCCGATGGCCGTCGAGACGCTCCTCGAGGTGAGCGATCGGCTTCGCCGGGGCGAGATTCCCCCCGACGACGTCATCGTCCTGGCGGAGGGAGGCGAGCTGGACGCGAAGCAGCTGCGGCCGGTGCTGCTGGCCTTCGGGCGACTCCGGAGGCTCCAGCGGAAGATCGCGGCGCTCCAGGATTCGTTCGGCGACAAGCGCCGGTCGAAGGCGAGCCGGACCATCCGAGCGAAGGCGATCGCGGCGGCCCACGAGGCAATCCAGAAGGTCGTGGCCGACCTGCCGCTCAAGCCGGCGCTCGTCGATGACGTCGTGGCCCAGGTCCGCGGGCGCTGGGAGCGCATCAGCCAGCTCGCTGAGGAGGCGCGCCGGAACCAGCCTACCGCCGGCCGCGAGCTCCGGGAGCTCGAGCGGGCCGTCGGCCTGCCGCGCCGGCAGCTGGGCCAGCTCCTCGAGCAGATCGAGCAGAGCGACCGCACGGTGCGTCAGGCCAAGCGAGAGCTGATGGAGGCCAATCTCCGACTGGTCGTCTCCGTGGCCAAGCGCTACCTGGGCAGCGACCTGTCGCTGCTCGACCTCGTCCAGGAGGGCAACATCGGGCTCATGAAGGCCGTCGACCGGTTCCAGTACCGTCGCGGCTTCAAGTTCTCGACGTACGCGACGTGGTGGATCCGCCAGGCCATCACGCGAGCGATCGCCGACCACTCGCGCACGATCCGGATCCCCGTCCACATGGTCGAGACGCTCAACCGGATCTCCCGGGTGAACCGCGGCCTCGTCAACGAGATGGGGCGCGAGCCCACGCCGGAAGAGCTCGCTCAGCGGACCGGCGTGCCGGCGAAGAAGGTGCGGCTCATTCTGGAGTCGTCGCGGAAGCCCCTGTCGCTCGAGACACCGATCGGCGAGGACTCCGAGCTCGGTGACTTCCTCGAGGACAAGTCCGCCGGCTCGCCGAACGAGTCGCTCCTCAACCAGGACCTGACGACGCAGGTTGAGCGGGCGCTCTCTACGCTCTCGCCCAAGGAGAAGGAGATCCTGCGCCTGCGGTTCGGCATCGGCGAGGAGGGCGAGCACACCCTCGAGGAGGTCGGCAGGCGCTTCGCGGTCACGCGTGAGCGCATCCGACAGATCGAGGCCAAGGCGCTCCGAAAGCTGCGGCACCCGCTGCGCGGCCGCAACCTTCGCGCCTTCGTCGAGAACTAG
PROTEIN sequence
Length: 498
MTFREGTREVDAGATAAAPGAVTSPEEPETPVALGEEPEDTPRPEPLEAGAAPRGEDPVRLYLKEIGKVHLLTAAQEVQIGRRIEVGQIALRRTLAGIPMAVETLLEVSDRLRRGEIPPDDVIVLAEGGELDAKQLRPVLLAFGRLRRLQRKIAALQDSFGDKRRSKASRTIRAKAIAAAHEAIQKVVADLPLKPALVDDVVAQVRGRWERISQLAEEARRNQPTAGRELRELERAVGLPRRQLGQLLEQIEQSDRTVRQAKRELMEANLRLVVSVAKRYLGSDLSLLDLVQEGNIGLMKAVDRFQYRRGFKFSTYATWWIRQAITRAIADHSRTIRIPVHMVETLNRISRVNRGLVNEMGREPTPEELAQRTGVPAKKVRLILESSRKPLSLETPIGEDSELGDFLEDKSAGSPNESLLNQDLTTQVERALSTLSPKEKEILRLRFGIGEEGEHTLEEVGRRFAVTRERIRQIEAKALRKLRHPLRGRNLRAFVEN*