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13_1_20cm_full_scaffold_2499

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_2499_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..1258)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1T8_CALAS
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_full_scaffold_2499_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1255..1935)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000374C51F
methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
type 12 methyltransferase
13_1_20cm_full_scaffold_2499_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1992..3149)
DNA (1158bp) protein (386aa)
Aminotransferase class I and II n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FLE9_DESAA rbh
aspartate aminotransferase Tax=GWA2_Rokubacteria_73_35_curated
aspartate aminotransferase
13_1_20cm_full_scaffold_2499_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3146..3868)
DNA (723bp) protein (241aa)
glycosyl transferase family 2 protein (EC:2.4.1.-); K00729 dolichyl-phosphate beta-glucosyltransferase [EC:2.4.1.117] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
glycosyl transferase family 2 protein (EC:2.4.1.-)
Glycosyl transferase, family 2 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIE6_9BACT
13_1_20cm_full_scaffold_2499_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3865..5298)
DNA (1434bp) protein (478aa)
malate dehydrogenase; K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
malate dehydrogenase (EC:1.1.1.38)
Malate dehydrogenase (Oxaloacetate decarboxylating) n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AX02_RUBXD
13_1_20cm_full_scaffold_2499_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5595..7088
DNA (1494bp) protein (498aa)
RNA polymerase sigma factor SigA n=2 Tax=Acidobacterium capsulatum RepID=C1F1D9_ACIC5
rpoD; RNA polymerase sigma factor rpoD; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rpoD; RNA polymerase sigma factor rpoD
13_1_20cm_full_scaffold_2499_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(7210..7719)
DNA (510bp) protein (170aa)
DinB family protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EMN8_9CHLR
DinB family protein Tax=CSP1_6_Rokubacteria
13_1_20cm_full_scaffold_2499_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7730..7945)
DNA (216bp) protein (72aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HH44_ANADF
biotin/lipoic acid binding domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
biotin/lipoyl attachment domain-containing protein
13_1_20cm_full_scaffold_2499_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7938..8453)
DNA (516bp) protein (172aa)
Carbamoyl-phosphate synthase L chain ATP-binding protein; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein n=1 Tax=Bacillus sp. ZYK RepID=UPI0002DBB539
Carbamoyl-phosphate synthase L chain ATP-binding protein
13_1_20cm_full_scaffold_2499_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8417..8944)
DNA (528bp) protein (176aa)
biotin carboxylase (EC:6.3.4.14 6.4.1.1); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
accC; acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0C7_THERP
13_1_20cm_full_scaffold_2499_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9225..10211)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZWY9_9ACTN
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_20cm_full_scaffold_2499_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10215..10970)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5AGU0_9ACTN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_full_scaffold_2499_13
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11060..12019)
DNA (960bp) protein (320aa)
UPI0003CF656F related cluster n=1 Tax=unknown RepID=UPI0003CF656F
Uncharacterized protein {ECO:0000313|EMBL:ESX79996.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
taurine catabolism dioxygenase
13_1_20cm_full_scaffold_2499_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12070..12549)
DNA (480bp) protein (160aa)
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJA9_9BACT
Displaying 14 items

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