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13_1_20cm_full_scaffold_1724

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_full_scaffold_1724_1
unknown

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comp(2..70)
-----------------
DNA (69bp)
protein (23aa)

This feature has no annotations

13_1_20cm_full_scaffold_1724_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(88..1068)
-----------------
DNA (981bp)
protein (327aa)
Chaperone DnaJ domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U238_9CHLR
Chaperone DnaJ domain protein {ECO:0000313|EMBL:EFH80922.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter
chaperone DnaJ domain-containing protein
13_1_20cm_full_scaffold_1724_3
R_NC10_66_22, NC10, Bacteria

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comp(1238..2020)
-----------------
DNA (783bp)
protein (261aa)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F324_9DELT
3-hydroxyacyl-CoA dehydrogenase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
3-hydroxyacyl-CoA dehydrogenase
13_1_20cm_full_scaffold_1724_4
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(2057..3394)
-----------------
DNA (1338bp)
protein (446aa)
phenylacetate-CoA ligase (EC:6.2.1.30)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=869210 species="Bacteria;
Phenylacetate-CoA ligase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NK43_MARHT rbh
13_1_20cm_full_scaffold_1724_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(3550..5040)
-----------------
DNA (1491bp)
protein (497aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDV1_9CHLR
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EFH90233.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae;
drug resistance transporter, EmrB/QacA subfamily
13_1_20cm_full_scaffold_1724_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(5149..6720)
-----------------
DNA (1572bp)
protein (524aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDV1_9CHLR rbh
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EFH90233.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae;
drug resistance transporter, EmrB/QacA subfamily
13_1_20cm_full_scaffold_1724_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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6902..7150
-----------------
DNA (249bp)
protein (83aa)
Insertion element protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4V0_9CHLR
Insertion element protein {ECO:0000313|EMBL:EFH81530.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter rac
13_1_20cm_full_scaffold_1724_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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7096..7506
-----------------
DNA (411bp)
protein (137aa)
IS1 transposase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMP2_9CHLR
IS1 transposase {ECO:0000313|EMBL:EFH87042.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM
Insertion element
13_1_20cm_full_scaffold_1724_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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7531..8181
-----------------
DNA (651bp)
protein (217aa)
Integrase catalytic region n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TXQ3_9CHLR
Integrase catalytic region {ECO:0000313|EMBL:EFH83100.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter ra
Tranposase
13_1_20cm_full_scaffold_1724_10
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

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8706..8996
-----------------
DNA (291bp)
protein (97aa)
Transposase n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QUB0_NOSS7
transposase
Transposase {ECO:0000313|EMBL:AFY48998.1}; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
13_1_20cm_full_scaffold_1724_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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9060..10091
-----------------
DNA (1032bp)
protein (344aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X8C0_NAKMY
transposase IS116/IS110/IS902 family protein
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:ACV77096.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipar
13_1_20cm_full_scaffold_1724_12
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(10401..11390)
-----------------
DNA (990bp)
protein (330aa)
Cyclase family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVR1_9CHLR rbh
Cyclase family protein {ECO:0000313|EMBL:EFH84294.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemi
cyclase family protein
13_1_20cm_full_scaffold_1724_13
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11569..12000)
-----------------
DNA (432bp)
protein (144aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. H160 RepID=B5WK77_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EEA01228.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H
hypothetical protein
13_1_20cm_full_scaffold_1724_14
unknown

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comp(12502..12639)
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

13_1_20cm_full_scaffold_1724_15
Brevibacillus sp. BC25, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12688..13320)
-----------------
DNA (633bp)
protein (211aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000361DFFB
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:EJL20296.1}; TaxID=1144308 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibac
transcriptional regulator
Displaying 15 items

View Taxonomy