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13_1_20cm_3_scaffold_1253

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1253_1
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..428)
DNA (426bp) protein (142aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonos
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RQX9_9ACTO
putative GTPase
13_1_20cm_3_scaffold_1253_2
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(398..1594)
DNA (1197bp) protein (399aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Salinispora pacifica RepID=UPI00036A7219 rbh
13_1_20cm_3_scaffold_1253_3
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1654..2361
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F9Y0_VERMA
Uncharacterized protein {ECO:0000313|EMBL:AEB47091.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-
hypothetical protein
13_1_20cm_3_scaffold_1253_4
unknown

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2733..2852
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_20cm_3_scaffold_1253_5
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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3011..3454
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W9Q9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AGZ45879.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
hypothetical protein
13_1_20cm_3_scaffold_1253_6
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3786..4406
DNA (621bp) protein (207aa)
RNA polymerase sigma factor n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HHN5_ACTM4
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (
putative RNA polymerase ECF-subfamily sigma factor
13_1_20cm_3_scaffold_1253_7
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4412..4696
DNA (285bp) protein (95aa)
anti-sigma factor n=1 Tax=Salinispora pacifica RepID=UPI000375709D
Uncharacterized protein {ECO:0000313|EMBL:ABP56144.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BA
hypothetical protein
13_1_20cm_3_scaffold_1253_8
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4954..5169
DNA (216bp) protein (72aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F906_VERMA
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:AEB47086.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verru
biotin/lipoyl attachment domain-containing protein
13_1_20cm_3_scaffold_1253_9
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5159..5731)
DNA (573bp) protein (191aa)
Putative transcriptional regulator, TetR family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AUZ3_STRRD
TetR family transcriptional regulator {ECO:0000313|EMBL:ETK32714.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp.
TetR family transcriptional regulator
13_1_20cm_3_scaffold_1253_10
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5862..7427
DNA (1566bp) protein (522aa)
EmrB/QacA family drug resistance transporter n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AUZ4_STRRD
EmrB/QacA family drug resistance transporter {ECO:0000313|EMBL:ACZ86856.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Stre
EmrB/QacA family drug resistance transporter
13_1_20cm_3_scaffold_1253_11
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7572..8627
DNA (1056bp) protein (352aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16) rbh
Glutamine-fructose-6-phosphate transaminase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RQW7_9ACTO rbh
Glutamine-fructose-6-phosphate transaminase {ECO:0000313|EMBL:EEP71523.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospo
13_1_20cm_3_scaffold_1253_12
unknown

Not on your lists

comp(8617..9066)
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_20cm_3_scaffold_1253_13
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9110..10585
DNA (1476bp) protein (492aa)
ATPase n=1 Tax=Actinoplanes globisporus RepID=UPI00035E8095
Histidine kinase dimerization/phosphoacceptor {ECO:0000313|EMBL:AEB47083.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosis
histidine kinase dimerization/phosphoacceptor
13_1_20cm_3_scaffold_1253_14
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10890..12500
DNA (1611bp) protein (537aa)
Sulfite reductase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RQW5_9ACTO
Sulfite reductase {ECO:0000313|EMBL:EEP71521.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
sulfite reductase (ferredoxin)
13_1_20cm_3_scaffold_1253_15
Streptomyces sp. PAMC26508, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12497..12643
DNA (147bp) protein (49aa)
UPI0003C7F97F related cluster n=1 Tax=unknown RepID=UPI0003C7F97F
Ferredoxin-like protein involved in electron transfer {ECO:0000313|EMBL:AGJ58127.1}; TaxID=1265601 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Strep
hypothetical protein
13_1_20cm_3_scaffold_1253_16
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12640..13338
DNA (699bp) protein (233aa)
Phosphoadenosine phosphosulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; EC=1.8.4.8 {ECO:0000256|HAMAP-Rule:MF_00063};; 3'-phosphoadenylylsulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI0003660408
phosphoadenosine phosphosulfate reductase
13_1_20cm_3_scaffold_1253_17
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13328..14080
DNA (753bp) protein (251aa)
Cobalamin biosynthesis protein cbiX {ECO:0000313|EMBL:CCH21124.1}; EC=4.99.1.3 {ECO:0000313|EMBL:CCH21124.1};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; M
Cobalamin biosynthesis protein cbiX n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LBC7_9ACTO
cobalamin biosynthesis protein cbiX
13_1_20cm_3_scaffold_1253_18
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14157..14351)
DNA (195bp) protein (65aa)
Transcriptional regulator WhiB n=3 Tax=Micromonosporaceae RepID=F4F8Z7_VERMA
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupin
transcription factor WhiB
Displaying 18 items

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