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13_1_20cm_3_scaffold_153

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_153_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..893
DNA (891bp) protein (297aa)
Amylo-alpha-1,6-glucosidase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XLI9_SORCE
Amylo-alpha-1,6-glucosidase {ECO:0000313|EMBL:AGP34037.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangi
amylo-alpha-1,6-glucosidase
13_1_20cm_3_scaffold_153_2
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

936..1271
DNA (336bp) protein (112aa)
Uncharacterized protein n=2 Tax=Micromonospora RepID=E8S560_MICSL
Uncharacterized protein {ECO:0000313|EMBL:ABV96090.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-2
hypothetical protein
13_1_20cm_3_scaffold_153_3
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1358..1984
DNA (627bp) protein (209aa)
Transcriptional regulator, GntR family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AXC6_STRRD
GntR family transcriptional regulator {ECO:0000313|EMBL:EQD82244.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolysp
GntR family transcriptional regulator
13_1_20cm_3_scaffold_153_4
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1981..2820)
DNA (840bp) protein (280aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9VE39_9ACTO rbh
Predicted protein {ECO:0000313|EMBL:EFL05796.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
Hypothetical protein
13_1_20cm_3_scaffold_153_5
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2817..3818)
DNA (1002bp) protein (334aa)
Oxidoreductase {ECO:0000313|EMBL:CAM03205.1}; EC=1.1.1.122 {ECO:0000313|EMBL:CAM03205.1};; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" s
oxidoreductase (EC:1.1.1.122)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037497C1
13_1_20cm_3_scaffold_153_6
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3815..4129)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2Q940_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:AIG74747.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
Hypothetical protein
13_1_20cm_3_scaffold_153_7
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4156..5199)
DNA (1044bp) protein (348aa)
Putative ABC transport system integral membrane component n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9YZY9_STRSW rbh
ATPase {ECO:0000313|EMBL:KJK57592.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
ABC transporter rbh
13_1_20cm_3_scaffold_153_8
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5189..6772)
DNA (1584bp) protein (528aa)
ABC transporter related n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q8W3_CATAD
ABC transporter related {ECO:0000313|EMBL:ACU70378.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
ABC transporter
13_1_20cm_3_scaffold_153_9
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6883..7932)
DNA (1050bp) protein (350aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q8W4_CATAD
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:ACU70379.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;"
sugar ABC transporter substrate-binding protein
13_1_20cm_3_scaffold_153_10
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7995..8753)
DNA (759bp) protein (253aa)
short-chain dehydrogenase n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI000372AAC9 rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KKD08694.1}; TaxID=1415558 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
oxidoreductase
13_1_20cm_3_scaffold_153_11
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8753..10060)
DNA (1308bp) protein (436aa)
mandelate racemase/muconate lactonizing enzyme (EC:5.1.2.2)
fuconate dehydratase n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002379630
Fuconate dehydratase {ECO:0000313|EMBL:EQD82240.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;
13_1_20cm_3_scaffold_153_12
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10057..10899)
DNA (843bp) protein (281aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Streptomyces RepID=UPI00035F9638 rbh
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:AGP57518.1}; TaxID=1343740 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase rbh
13_1_20cm_3_scaffold_153_13
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11023..11796)
DNA (774bp) protein (258aa)
carbohydrate-binding protein n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI00036B10F4
Carbohydrate binding module family protein {ECO:0000313|EMBL:KFM94519.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macer
carbohydrate binding family 6
13_1_20cm_3_scaffold_153_14
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11862..12785)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000363A6AF rbh
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EXG80678.1}; Flags: Precursor;; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cr
NAD-dependent epimerase/dehydratase
13_1_20cm_3_scaffold_153_15
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12875..13966)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI000379DFCB
Uncharacterized protein {ECO:0000313|EMBL:ETK32074.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
hypothetical protein
13_1_20cm_3_scaffold_153_16
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14315..15895
DNA (1581bp) protein (527aa)
Glycosyl hydrolase n=1 Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=E2PY05_STRC2
Glycosyl hydrolase {ECO:0000313|EMBL:EFG10181.1}; TaxID=443255 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27
glycosyl hydrolase
13_1_20cm_3_scaffold_153_17
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15965..16861)
DNA (897bp) protein (299aa)
Dihydrodipicolinate synthase n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4THZ9_AMYOR
Dihydrodipicolinate synthase {ECO:0000313|EMBL:AHH96891.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
dihydrodipicolinate synthase
13_1_20cm_3_scaffold_153_18
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16910..17686)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00036C0663
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADB31466.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (stra
IclR family transcriptional regulator
13_1_20cm_3_scaffold_153_19
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17683..18435)
DNA (753bp) protein (251aa)
kduD; 2-deoxy-D-gluconate 3-dehydrogenase (EC:1.1.1.125)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI00037BDF5C rbh
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:EWM14544.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
13_1_20cm_3_scaffold_153_20
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18432..19193)
DNA (762bp) protein (254aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687
5-keto-4-deoxyuronate isomerase (EC:5.3.1.17)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI00037D0EA4
13_1_20cm_3_scaffold_153_21
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19346..20032
DNA (687bp) protein (229aa)
GntR family transcriptional regulator n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SVZ3_AMYOR
GntR family transcriptional regulator {ECO:0000313|EMBL:ETK32072.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp.
hypothetical protein
13_1_20cm_3_scaffold_153_22
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20146..21069)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI0003802F25
Uncharacterized protein {ECO:0000313|EMBL:KIF75369.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
L-lactate transport
13_1_20cm_3_scaffold_153_23
unknown

Not on your lists

21299..21523
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_20cm_3_scaffold_153_24
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22160..23176
DNA (1017bp) protein (339aa)
Transcriptional regulator, LacI family n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KAA3_SACES
LacI family transcription regulator {ECO:0000313|EMBL:AHH96218.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 438
LacI family transcription regulator
13_1_20cm_3_scaffold_153_25
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23213..24445
DNA (1233bp) protein (411aa)
Spermidine/putrescine transport system substrate-binding protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QI37_CATAD rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EWT04687.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium c
spermidine/putrescine transporter substrate-binding protein rbh
13_1_20cm_3_scaffold_153_26
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24442..25596
DNA (1155bp) protein (385aa)
spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI000371A436 rbh
Spermidine/putrescine ABC transporter ATPase {ECO:0000313|EMBL:EOD67073.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatops
spermidine/putrescine ABC transporter ATPase
13_1_20cm_3_scaffold_153_27
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25593..26537
DNA (945bp) protein (315aa)
ABC transport system permease protein n=3 Tax=Amycolatopsis mediterranei RepID=D8HKN4_AMYMU rbh
ABC transporter permease {ECO:0000313|EMBL:AEK47669.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (stra
ABC transporter permease
13_1_20cm_3_scaffold_153_28
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26537..27403
DNA (867bp) protein (289aa)
Permease component of ABC-type spermidine/putrescine transport system n=3 Tax=Amycolatopsis mediterranei RepID=D8HKN3_AMYMU rbh
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:AEK47668.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatop
spermidine/putrescine ABC transporter permease
13_1_20cm_3_scaffold_153_29
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27420..29150
DNA (1731bp) protein (577aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036624E4 rbh
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:EWM17690.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
dihydroxy-acid dehydratase rbh
13_1_20cm_3_scaffold_153_30
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29328..30212
DNA (885bp) protein (295aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V081_9ACTO
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EGD41246.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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