ggKbase home page

13_1_20cm_3_scaffold_17030

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_17030_1
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..564
DNA (564bp) protein (188aa)
RNA polymerase sigma factor SigA n=1 Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X4Z1_SALTO
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aura
RNA polymerase sigma factor
13_1_20cm_3_scaffold_17030_2
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

734..967
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Salinispora RepID=A4X4Z0_SALTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP74135.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC
hypothetical protein
13_1_20cm_3_scaffold_17030_3
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1025..2731)
DNA (1707bp) protein (569aa)
Type iii restriction protein res subunit n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FDU5_VERMA rbh
Type iii restriction protein res subunit {ECO:0000313|EMBL:AEB43626.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora
type iii restriction protein res subunit
13_1_20cm_3_scaffold_17030_4
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2864..3115)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RDI0_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP74132.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC
hypothetical protein
13_1_20cm_3_scaffold_17030_5
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3552..4040
DNA (489bp) protein (163aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=1150864 spec
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KYW8_9ACTO
Indigoidine synthase A family protein
13_1_20cm_3_scaffold_17030_6
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4037..4945
DNA (909bp) protein (303aa)
Ribokinase {ECO:0000313|EMBL:CCH16764.1}; EC=2.7.1.15 {ECO:0000313|EMBL:CCH16764.1};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="
ribokinase n=1 Tax=Salinispora arenicola RepID=UPI00036F3DF1 rbh
ribokinase-like domain-containing protein
13_1_20cm_3_scaffold_17030_7
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4907..5251)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000366A4DC
Uncharacterized protein {ECO:0000313|EMBL:EWM65245.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
13_1_20cm_3_scaffold_17030_8
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5479..6048)
DNA (570bp) protein (190aa)
iron-sulfur cluster assembly protein HesB n=1 Tax=Actinoplanes globisporus RepID=UPI00035DE703
Uncharacterized protein {ECO:0000313|EMBL:AGZ45330.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
hypothetical protein
13_1_20cm_3_scaffold_17030_9
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6208..6591
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003657ED1
X-linked retinitis pigmentosa GTPase regulator {ECO:0000313|EMBL:AEV84751.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplane
rpgR; X-linked retinitis pigmentosa GTPase regulator
13_1_20cm_3_scaffold_17030_10
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6531..7409
DNA (879bp) protein (293aa)
RCC1 repeat protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RQT3_9ACTO
bnr repeat-containing protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
regulator of chromosome condensation RCC1
13_1_20cm_3_scaffold_17030_11
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7529..8047
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037482D6
Uncharacterized protein {ECO:0000313|EMBL:ABK52385.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulol
hypothetical protein
13_1_20cm_3_scaffold_17030_12
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8026..8604
DNA (579bp) protein (193aa)
Peptidase S26B, signal peptidase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTH2_ACIC1
Peptidase S26B, signal peptidase {ECO:0000313|EMBL:ABK52732.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (st
peptidase S26B, signal peptidase
13_1_20cm_3_scaffold_17030_13
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8597..10048
DNA (1452bp) protein (484aa)
Methyltransferase small n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KYW2_9ACTO rbh
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66851.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
methyltransferase small rbh
13_1_20cm_3_scaffold_17030_14
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10045..10488
DNA (444bp) protein (148aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=263358 species="Bacter
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Actinoplanes globisporus RepID=UPI000364CDA6
d-tyrosyl-tRNA(tyr) deacylase
13_1_20cm_3_scaffold_17030_15
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10596..11060
DNA (465bp) protein (155aa)
RNA polymerase sigma factor n=1 Tax=Micromonospora sp. CNB394 RepID=UPI0003741689
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;
RpoD subfamily RNA polymerase sigma-70 subunit
Displaying 15 items

View Taxonomy