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13_1_20cm_3_scaffold_2298

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2298_1
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..560)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PRE5_KRIFD
Uncharacterized protein {ECO:0000313|EMBL:ADB34863.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (
hypothetical protein
13_1_20cm_3_scaffold_2298_2
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(628..2193)
DNA (1566bp) protein (522aa)
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:ACU73115.1}; EC=3.2.1.52 {ECO:0000313|EMBL:ACU73115.1};; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulispor
beta-N-acetylhexosaminidase (EC:3.2.1.52) rbh
Beta-N-acetylhexosaminidase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QI70_CATAD rbh
13_1_20cm_3_scaffold_2298_3
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2230..2790
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K7D1_SACES
Uncharacterized protein {ECO:0000313|EMBL:CCH33452.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strai
hypothetical protein
13_1_20cm_3_scaffold_2298_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2798..3445
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036B91B9
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:AEA27864.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source=
ATPase
13_1_20cm_3_scaffold_2298_5
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3406..3606
DNA (201bp) protein (67aa)
Putative ATPase, AAA family n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RTB3_BLASD
ATPase {ECO:0000313|EMBL:KGH46774.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
AAA ATPase
13_1_20cm_3_scaffold_2298_6
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3597..4694
DNA (1098bp) protein (366aa)
VWA containing CoxE family protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F578_MODMB rbh
von Willebrand factor A {ECO:0000313|EMBL:KGH46773.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
VWA containing CoxE family protein
13_1_20cm_3_scaffold_2298_7
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4687..6345
DNA (1659bp) protein (553aa)
xdhC; Xanthine dehydrogenase, small subunit, 2Fe-2S ferredoxin, iron-sulfur binding (EC:1.17.1.4)
Xanthine dehydrogenase, small subunit, 2Fe-2S ferredoxin, iron-sulphur binding n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F577_MODMB
XshC-Cox1 family protein {ECO:0000313|EMBL:KGH46772.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
13_1_20cm_3_scaffold_2298_8
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6520..7002
DNA (483bp) protein (161aa)
Carbon-monoxide dehydrogenase Fe-S binding small subunit {ECO:0000313|EMBL:CCG05589.1}; EC=1.2.99.2 {ECO:0000313|EMBL:CCG05589.1};; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales;
coxS2; carbon-monoxide dehydrogenase Fe-S binding small subunit (EC:1.2.99.2)
Carbon-monoxide dehydrogenase Fe-S binding small subunit n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RT89_BLASD
13_1_20cm_3_scaffold_2298_9
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6999..9368
DNA (2370bp) protein (790aa)
carbon monoxide dehydrogenase large subunit (EC:1.2.99.2)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000372F50A
Aldehyde dehydrogenase {ECO:0000313|EMBL:EQD83680.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D
13_1_20cm_3_scaffold_2298_10
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9365..10228
DNA (864bp) protein (288aa)
coxM; carbon monoxide dehydrogenase FAD binding medium subunit (EC:1.2.99.2)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KWV1_STRRC rbh
Uncharacterized protein {ECO:0000313|EMBL:EST35896.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp
13_1_20cm_3_scaffold_2298_11
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10218..10814
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4QSX2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCK25396.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
hypothetical protein
13_1_20cm_3_scaffold_2298_12
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(10786..11334)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI00030D5052
Uncharacterized protein {ECO:0000313|EMBL:KIJ79613.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
13_1_20cm_3_scaffold_2298_13
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11451..13634
DNA (2184bp) protein (728aa)
glucan 1,4-alpha-glucosidase n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036E3F30
Glucan 1,4-alpha-glucosidase {ECO:0000313|EMBL:AEK43155.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (
glucan 1,4-alpha-glucosidase
13_1_20cm_3_scaffold_2298_14
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13676..14470)
DNA (795bp) protein (265aa)
Type 11 methyltransferase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FBW2_VERMA
Type 11 methyltransferase {ECO:0000313|EMBL:AEB44762.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain A
type 11 methyltransferase
13_1_20cm_3_scaffold_2298_15
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14482..15219)
DNA (738bp) protein (246aa)
sulfatase n=1 Tax=Amycolatopsis methanolica RepID=UPI00036D7A1B
Uncharacterized protein {ECO:0000313|EMBL:AIJ23385.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
hypothetical protein
13_1_20cm_3_scaffold_2298_16
unknown

Not on your lists

comp(16212..17573)
DNA (1362bp) protein (454aa)

This feature has no annotations

13_1_20cm_3_scaffold_2298_17
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17570..18073)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI0003826254
Uncharacterized protein {ECO:0000313|EMBL:KGN30252.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
sig51; ECF subfamily RNA polymerase sigma factor
13_1_20cm_3_scaffold_2298_18
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18332..19258)
DNA (927bp) protein (309aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JBR7_FRASU rbh
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ADP81087.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
alcohol dehydrogenase
13_1_20cm_3_scaffold_2298_19
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19400..20044
DNA (645bp) protein (215aa)
Response regulator receiver domain protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7EW00_9ACTO
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJK33208.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aeroco
putative two-component system response regulator
13_1_20cm_3_scaffold_2298_20
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20171..20557
DNA (387bp) protein (129aa)
LuxR family transcriptional regulator n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B4EB5C
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADU15174.1}; Flags: Precursor;; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacter
two component transcriptional regulator, LuxR family
13_1_20cm_3_scaffold_2298_21
unknown

Not on your lists

20791..20928
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_20cm_3_scaffold_2298_22
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20929..21735
DNA (807bp) protein (269aa)
IclR family transcriptional regulator n=1 Tax=Streptomyces acidiscabies RepID=UPI000288F0AA
Transcriptional regulator, IclR family, C-terminal domain protein {ECO:0000313|EMBL:EKX61739.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" so
transcriptional regulator, IclR family
13_1_20cm_3_scaffold_2298_23
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21795..26615)
DNA (4821bp) protein (1607aa)
cytochrome P450 (EC:1.14.-.-)
hypothetical protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B16E rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD66970.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
13_1_20cm_3_scaffold_2298_24
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26612..27106)
DNA (495bp) protein (165aa)
long-chain acyl-CoA synthetase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B16F
Non-ribosomal peptide synthetase {ECO:0000313|EMBL:EWM15995.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
Displaying 24 items

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