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13_1_20cm_3_scaffold_2344

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2344_1
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..162)
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Salinispora tropica RepID=UPI00036D1456
Uncharacterized protein {ECO:0000313|EMBL:EWM19855.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
13_1_20cm_3_scaffold_2344_2
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(166..1431)
DNA (1266bp) protein (422aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=47853 species="Bacteria
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RAR3_9ACTO rbh
13_1_20cm_3_scaffold_2344_3
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1515..1997)
DNA (483bp) protein (161aa)
30S ribosomal protein S9 n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LC06_9ACTO
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" sou
30S ribosomal protein S9
13_1_20cm_3_scaffold_2344_4
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1994..2437)
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RAR5_9ACTO
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" sou
rplM; 50S ribosomal protein L13
13_1_20cm_3_scaffold_2344_5
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2565..3023)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Mycobacterium avium RepID=UPI0003731F7C
MarR family transcriptional regulator {ECO:0000313|EMBL:AEF35155.1}; TaxID=875328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (st
MarR family transcriptional regulator
13_1_20cm_3_scaffold_2344_6
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3127..3546
DNA (420bp) protein (140aa)
Putative membrane protein n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WL47_9ACTO
Membrane protein {ECO:0000313|EMBL:ETK37464.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
13_1_20cm_3_scaffold_2344_7
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3613..4989)
DNA (1377bp) protein (459aa)
Major facilitator transporter n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MUQ9_9ACTO rbh
Nitrate/nitrite transporter {ECO:0000313|EMBL:EIV93288.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
putative nitrate extrusion protein rbh
13_1_20cm_3_scaffold_2344_8
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5212..7257
DNA (2046bp) protein (682aa)
Molybdopterin oxidoreductase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RAR9_9ACTO rbh
Molybdopterin oxidoreductase {ECO:0000313|EMBL:EEP71701.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 391
molybdopterin oxidoreductase rbh
13_1_20cm_3_scaffold_2344_9
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7227..8768
DNA (1542bp) protein (514aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RAS0_9ACTO rbh
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:EEP71702.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" sour
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_20cm_3_scaffold_2344_10
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8765..11122
DNA (2358bp) protein (786aa)
Nitrite reductase (NAD(P)H) large subunit {ECO:0000313|EMBL:CCH21361.1}; EC=1.7.1.4 {ECO:0000313|EMBL:CCH21361.1};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporace
Nitrite reductase (NAD(P)H) large subunit n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LC14_9ACTO rbh
nitrite reductase (NAD(P)H) large subunit
13_1_20cm_3_scaffold_2344_11
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11119..11445
DNA (327bp) protein (109aa)
nitrite reductase n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00036F7084
Nitrite reductase {ECO:0000313|EMBL:KGH47013.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
nitrite reductase (NAD(P)H) small subunit
13_1_20cm_3_scaffold_2344_12
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11442..12536
DNA (1095bp) protein (365aa)
Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein {ECO:0000313|EMBL:AEB47259.1}; EC=4.2.1.75 {ECO:0000313|EMBL:AEB47259.1};; TaxID=263358 species="Bacteria; Actinobacteria
bifunctional uroporphyrinogen-III synthetase/response regulator domain-containing protein (EC:4.2.1.75)
uroporphyrinogen III synthetase n=1 Tax=Catelliglobosispora koreensis RepID=UPI00037873C8 rbh
13_1_20cm_3_scaffold_2344_13
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12632..13207
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MDA3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPJ34326.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
hypothetical protein
13_1_20cm_3_scaffold_2344_14
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13246..13746)
DNA (501bp) protein (167aa)
ATP/GTP-binding protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LC17_9ACTO
ATP/GTP-binding protein {ECO:0000313|EMBL:CCH21364.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupa
hypothetical protein
13_1_20cm_3_scaffold_2344_15
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13727..14089)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VQL0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AGZ39243.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
hypothetical protein
13_1_20cm_3_scaffold_2344_16
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14129..14542)
DNA (414bp) protein (138aa)
Roadblock/LC7 family protein n=3 Tax=Micromonospora RepID=D9TF06_MICAI
Roadblock/LC7 family protein {ECO:0000313|EMBL:ADL48979.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (
roadblock/LC7 family protein
13_1_20cm_3_scaffold_2344_17
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14542..17268)
DNA (2727bp) protein (909aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" s
histidine kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036DADD9
13_1_20cm_3_scaffold_2344_18
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17760..18926
DNA (1167bp) protein (389aa)
Extracellular ligand-binding receptor n=1 Tax=Micromonospora sp. (strain L5) RepID=E8SAL6_MICSL rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADL48981.1}; Flags: Precursor;; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source=
extracellular ligand-binding receptor
13_1_20cm_3_scaffold_2344_19
Rhizoctonia solani, Rhizoctonia, Cantharellales, Agaricomycetes, Basidiomycota, Fungi

Not on your lists

comp(19922..20257)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI000377D283
Uncharacterized protein {ECO:0000313|EMBL:KEP45686.1}; Flags: Fragment;; TaxID=1423351 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Cantharellales; Ceratobasidia
13_1_20cm_3_scaffold_2344_20
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20441..21184)
DNA (744bp) protein (248aa)
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase (Modular protein) {ECO:0000313|EMBL:CCH21377.1}; EC=2.7.1.49 {ECO:0000313|EMBL:CCH21377.1};; EC=2.7.4.7 {ECO:0000313|EMBL:CCH21377.1};; TaxID=115
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036E7208
phosphomethylpyrimidine kinase
13_1_20cm_3_scaffold_2344_21
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21229..22905)
DNA (1677bp) protein (559aa)
ABC transporter related n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TF25_MICAI rbh
ABC transporter related {ECO:0000313|EMBL:ADL48998.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strai
ABC transporter-like protein
13_1_20cm_3_scaffold_2344_22
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22928..23521)
DNA (594bp) protein (198aa)
Methyltransferase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RAU7_9ACTO
Methyltransferase {ECO:0000313|EMBL:EEP71729.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
methyltransferase small
13_1_20cm_3_scaffold_2344_23
unknown

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23554..23715
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying 23 items

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