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13_1_20cm_3_scaffold_2856

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2856_1
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..348)
DNA (348bp) protein (116aa)
Putative RNA polymerase sigma factor n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GY46_ACTM4
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:BAL85683.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouri
putative RNA polymerase sigma factor
13_1_20cm_3_scaffold_2856_2
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(504..2048)
DNA (1545bp) protein (515aa)
Permease component of ABC-type sugar transporter n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TDQ0_MICAI rbh
LigA protein {ECO:0000313|EMBL:EWM63559.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
permease component of ABC-type sugar transporter
13_1_20cm_3_scaffold_2856_3
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2063..2854)
DNA (792bp) protein (264aa)
Putative formamidopyrimidine-DNA glycosylase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HHJ1_ACTM4 rbh
Putative formamidopyrimidine-DNA glycosylase {ECO:0000313|EMBL:BAL92478.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes
putative formamidopyrimidine-DNA glycosylase
13_1_20cm_3_scaffold_2856_4
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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2891..3805
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036DD6CE rbh
Putative amidohydrolase {ECO:0000313|EMBL:CCH19946.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupa
amidohydrolase family protein rbh
13_1_20cm_3_scaffold_2856_5
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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3802..4614
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F4H0_VERMA
Uncharacterized protein {ECO:0000313|EMBL:AEB42928.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-
hypothetical protein
13_1_20cm_3_scaffold_2856_6
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4661..7417)
DNA (2757bp) protein (919aa)
Uncharacterized protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2QCW9_9PSEU rbh
Uncharacterized protein {ECO:0000313|EMBL:EMD29870.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;
Hypothetical protein
13_1_20cm_3_scaffold_2856_7
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7530..8771)
DNA (1242bp) protein (414aa)
Contig44, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77140.1}; EC=4.1.1.22 {ECO:0000313|EMBL:KIO77140.1};; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales;
PLP-dependent enzyme, glutamate decarboxylase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R3F6_OWEHD
PLP-dependent enzyme, glutamate decarboxylase
13_1_20cm_3_scaffold_2856_8
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9004..10506)
DNA (1503bp) protein (501aa)
amino acid permease n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEE11
Amino acid permease-associated region {ECO:0000313|EMBL:ADL47777.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aur
amino acid permease-associated protein
13_1_20cm_3_scaffold_2856_9
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10611..11258)
DNA (648bp) protein (216aa)
LuxR family transcriptional regulator n=1 Tax=Actinomadura atramentaria RepID=UPI00037B0844 rbh
Two-component system response regulator {ECO:0000313|EMBL:EWM67695.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora s
two component LuxR family transcriptional regulator rbh
13_1_20cm_3_scaffold_2856_10
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11255..12406)
DNA (1152bp) protein (384aa)
ATP-binding region ATPase domain protein n=2 Tax=Micromonospora RepID=D9TCY7_MICAI rbh
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR63169.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
ATP-binding region ATPase domain-containing protein rbh
Displaying 10 items

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