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13_1_20cm_3_scaffold_3905

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_3905_1
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..183)
DNA (183bp) protein (61aa)
Ubiquinone biosynthesis protein UbiB {ECO:0000313|EMBL:ETK34201.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp.
13_1_20cm_3_scaffold_3905_2
Actinoplanes globisporus, Actinoplanes, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

340..597
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000378540D
13_1_20cm_3_scaffold_3905_3
uncultured Streptomyces sp., Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(608..1036)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Salinispora tropica RepID=UPI000360EDFD
CAZy families GT2 protein {ECO:0000313|EMBL:AIA86309.1}; TaxID=174707 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; environmental samples.;" source="uncultured
hypothetical protein
13_1_20cm_3_scaffold_3905_4
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1033..2403)
DNA (1371bp) protein (457aa)
Glycosyl transferase n=1 Tax=Streptomyces sp. AA4 RepID=D9V7N8_9ACTO
Glycosyl transferase {ECO:0000313|EMBL:EFL09522.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
glycosyl transferase
13_1_20cm_3_scaffold_3905_5
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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2580..3305
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B51863
cell wall biosynthesis glycosyltransferase Tax=GWF2_Lentisphaerae_57_35_curated
cell wall biosynthesis glycosyltransferase
13_1_20cm_3_scaffold_3905_6
unknown

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comp(3897..4055)
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_20cm_3_scaffold_3905_7
unknown

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4427..4861
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_20cm_3_scaffold_3905_8
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(4837..5961)
DNA (1125bp) protein (375aa)
Glutamine--scyllo-inositol transaminase {ECO:0000313|EMBL:ACZ38576.1}; EC=2.6.1.50 {ECO:0000313|EMBL:ACZ38576.1};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sp
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2V9_SPHTD
13_1_20cm_3_scaffold_3905_9
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

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comp(5958..6992)
DNA (1035bp) protein (345aa)
putative dehydrogenase-like protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
Oxidoreductase, NAD-binding domain protein id=3959734 bin=GWA2_Ignavibacteria-rel_35_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
oxidoreductase domain-containing protein
13_1_20cm_3_scaffold_3905_10
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(6989..7630)
DNA (642bp) protein (214aa)
acetyltransferase Tax=GWF2_Nitrospirae_44_13_curated
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase id=3930386 bin=GWF2_Nitrospirae_44_13 species=Glaciecola chathamensis genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
acetyltransferase
13_1_20cm_3_scaffold_3905_11
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7729..8139)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00038026E7
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACU39313.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actin
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_3_scaffold_3905_12
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8150..8572)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00037CD15B
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCH33894.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix esp
Transcriptional regulator, AraC family
13_1_20cm_3_scaffold_3905_13
unknown

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comp(8883..9344)
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_20cm_3_scaffold_3905_14
unknown

Not on your lists

9653..9883
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_3_scaffold_3905_trna_2
unknown

Not on your lists

comp(10048..10121)
DNA (74bp)
transferRNA
13_1_20cm_3_scaffold_3905_trna_1
unknown

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comp(10158..10230)
DNA (73bp)
transferRNA
13_1_20cm_3_scaffold_3905_15
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10363..11247)
DNA (885bp) protein (295aa)
polysaccharide deacetylase n=1 Tax=Salinispora pacifica RepID=UPI00037EA374
Polysaccharide deacetylase {ECO:0000313|EMBL:ABP52777.1}; Flags: Precursor;; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora t
polysaccharide deacetylase
13_1_20cm_3_scaffold_3905_16
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11408..11824)
DNA (417bp) protein (139aa)
Transcriptional regulator, MerR family n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LES3_9ACTO
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CCH22320.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora l
regulatory protein MerR
Displaying 18 items

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