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13_1_20cm_3_scaffold_4023

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_4023_1
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(2..784)
DNA (783bp) protein (261aa)
hypothetical protein, partial n=1 Tax=Catelliglobosispora koreensis RepID=UPI000364E42D
ABC-2 type transporter; K09686 antibiotic transport system permease protein Tax=RBG_16_Actinobacteria_68_21_curated
ABC-2 type transporter
13_1_20cm_3_scaffold_4023_2
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(784..1749)
DNA (966bp) protein (322aa)
ABC transporter ATP-binding protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H4X3_STRPR
ABC transporter ATP-binding protein Tax=RBG_16_Actinobacteria_68_21_curated
daunorubicin resistance ABC transporter ATPase
13_1_20cm_3_scaffold_4023_3
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2128..2349
DNA (222bp) protein (74aa)
Transcriptional regulator, TetR family n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RU01_BLASD
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCG04411.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus sax
TetR family transcriptional regulator
13_1_20cm_3_scaffold_4023_4
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2842..3234
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8LEY3_FRASN
Uncharacterized protein {ECO:0000313|EMBL:ABW15623.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
hypothetical protein
13_1_20cm_3_scaffold_4023_5
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3401..3733
DNA (333bp) protein (111aa)
Putative transcriptional regulator n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YXE6_NOCFA
Putative transcriptional regulator {ECO:0000313|EMBL:BAD57145.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10
transcriptional regulator
13_1_20cm_3_scaffold_4023_6
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3730..4212
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YXE7_NOCFA
Uncharacterized protein {ECO:0000313|EMBL:BAD57144.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
hypothetical protein
13_1_20cm_3_scaffold_4023_7
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5042..5749)
DNA (708bp) protein (236aa)
membrane protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7346B
Membrane protein {ECO:0000313|EMBL:ETK36663.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
putative integral membrane protein
13_1_20cm_3_scaffold_4023_8
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5742..6095)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XIK4_MICPN
Uncharacterized protein {ECO:0000313|EMBL:BAK38242.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (st
hypothetical protein
13_1_20cm_3_scaffold_4023_9
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6114..7058)
DNA (945bp) protein (315aa)
Cation diffusion facilitator family transporter n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WGR4_KINRD rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ABS06003.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radio
cation diffusion facilitator family transporter rbh
13_1_20cm_3_scaffold_4023_10
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7055..7417)
DNA (363bp) protein (121aa)
Transcriptional regulator, ArsR family n=1 Tax=Mycobacterium sp. (strain JLS) RepID=A3Q7C9_MYCSJ
Uncharacterized protein {ECO:0000313|EMBL:AII11247.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
ArsR family transcriptional regulator
13_1_20cm_3_scaffold_4023_11
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7604..7951
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RAP6_9ACTO
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR63497.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
hypothetical protein
13_1_20cm_3_scaffold_4023_12
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7996..8826
DNA (831bp) protein (277aa)
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EXG81958.1}; EC=2.1.1.17 {ECO:0000313|EMBL:EXG81958.1};; EC=2.1.1.71 {ECO:0000313|EMBL:EXG81958.1};; TaxID=927661 species="B
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X8L2_9PSEU
type 11 methyltransferase
13_1_20cm_3_scaffold_4023_13
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8880..9713
DNA (834bp) protein (278aa)
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:ADB35410.1}; EC=3.2.1.52 {ECO:0000313|EMBL:ADB35410.1};; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;
beta-N-acetylhexosaminidase (EC:3.2.1.52)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI000363542D
13_1_20cm_3_scaffold_4023_14
unknown

Not on your lists

9724..9861
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_20cm_3_scaffold_4023_15
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9952..12840)
DNA (2889bp) protein (963aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI0003608108 rbh
Alpha-L-rhamnosidase A {ECO:0000313|EMBL:EAU67552.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stig
Alpha-L-rhamnosidase A rbh
13_1_20cm_3_scaffold_4023_16
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14293..15729
DNA (1437bp) protein (479aa)
Carbohydrate binding family 6 n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F8V6_VERMA
Carbohydrate binding family 6 {ECO:0000313|EMBL:AEB47036.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (stra
carbohydrate binding family 6
13_1_20cm_3_scaffold_4023_17
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15881..17269
DNA (1389bp) protein (463aa)
Glycosyl hydrolase n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LIQ7_9ACTO rbh
Glycosyl hydrolase {ECO:0000313|EMBL:AGL18298.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
Glycosyl hydrolase rbh
13_1_20cm_3_scaffold_4023_18
unknown

Not on your lists

comp(17284..18096)
DNA (813bp) protein (271aa)

This feature has no annotations

13_1_20cm_3_scaffold_4023_19
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18258..19037
DNA (780bp) protein (260aa)
Siderophore-interacting FAD-binding domain-containing protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LT18_9ACTO
Siderophore-interacting FAD-binding domain-containing protein {ECO:0000313|EMBL:AGL18844.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" sour
siderophore-interacting FAD-binding domain-containing protein
Displaying 19 items

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