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13_1_20cm_3_scaffold_6243

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_6243_1
unknown

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1..81
DNA (81bp) protein (27aa)

This feature has no annotations

13_1_20cm_3_scaffold_6243_2
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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78..386
DNA (309bp) protein (103aa)
membrane protein n=1 Tax=Serinicoccus profundi RepID=UPI000255EAF3
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66059.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
hypothetical protein
13_1_20cm_3_scaffold_6243_3
Streptomyces sp. PVA 94-07, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

414..728
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Streptomyces RepID=V4KPM2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ESQ07363.1}; TaxID=1223307 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PVA 94-07.;"
hypothetical protein
13_1_20cm_3_scaffold_6243_4
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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725..997
DNA (273bp) protein (91aa)
membrane protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037FB754
Uncharacterized protein {ECO:0000313|EMBL:AEV84349.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 3104
hypothetical protein
13_1_20cm_3_scaffold_6243_5
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(969..1616)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GZS6_ACTM4
Uncharacterized protein {ECO:0000313|EMBL:BAL86263.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain
hypothetical protein
13_1_20cm_3_scaffold_6243_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1717..3213
DNA (1497bp) protein (499aa)
Putative signaling protein n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8RZ28_ACTS5 rbh
Diguanylate cyclase {ECO:0000313|EMBL:AHG87841.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
diguanylate cyclase
13_1_20cm_3_scaffold_6243_7
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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3307..4812
DNA (1506bp) protein (502aa)
Carbohydrate-binding CenC domain protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PXF5_CATAD rbh
Carbohydrate-binding CenC domain protein {ECO:0000313|EMBL:ACU71408.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source=
carbohydrate-binding CenC domain-containing protein rbh
13_1_20cm_3_scaffold_6243_8
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4879..5511)
DNA (633bp) protein (211aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ACU2_THECD
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACY97431.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source=
LuxR family two component transcriptional regulator
13_1_20cm_3_scaffold_6243_9
unknown

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5782..5931
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_20cm_3_scaffold_6243_10
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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5949..7205
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003661C31 rbh
N-acetyl-glucosamine transferase {ECO:0000313|EMBL:AGZ46651.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis
N-acetyl-glucosamine transferase
13_1_20cm_3_scaffold_6243_11
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7217..8425
DNA (1209bp) protein (403aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WCF7_9ACTO rbh
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AGZ46652.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friulien
UDP-N-acetylglucosamine 2-epimerase rbh
13_1_20cm_3_scaffold_6243_12
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8434..8865)
DNA (432bp) protein (144aa)
sporulation protein SsgA n=1 Tax=Actinoplanes globisporus RepID=UPI00038132C6
Putative SsgA-family protein {ECO:0000313|EMBL:BAL91750.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (s
putative SsgA-family protein
13_1_20cm_3_scaffold_6243_trna_1
unknown

Not on your lists

9212..9283
DNA (72bp)
transferRNA
13_1_20cm_3_scaffold_6243_13
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9352..10107)
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4REL7_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP74261.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC
phage integrase family protein
13_1_20cm_3_scaffold_6243_14
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10651..11376
DNA (726bp) protein (242aa)
Urease accessory protein UreD n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFY8_9ACTO
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATC
urease accessory protein
13_1_20cm_3_scaffold_6243_15
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11461..12309)
DNA (849bp) protein (283aa)
smp-30/gluconolaconase/lre domain-containing protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AE89E
Smp-30/gluconolaconase/lre domain protein {ECO:0000313|EMBL:AEM71708.1}; Flags: Precursor;; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricaud
smp-30/gluconolaconase/lre domain-containing protein
13_1_20cm_3_scaffold_6243_16
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12383..12772)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI00036494B2
Uncharacterized protein {ECO:0000313|EMBL:CEL22859.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-N
hypothetical protein
Displaying 17 items

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