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13_1_20cm_3_scaffold_759

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_759_1
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..476)
-----------------
DNA (474bp)
protein (158aa)
L-lactate permease n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W264_9ACTO
L-lactate permease {ECO:0000313|EMBL:AGZ43092.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
L-lactate permease
13_1_20cm_3_scaffold_759_2
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(481..885)
-----------------
DNA (405bp)
protein (135aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W2Q5_9ACTO
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friu
hypothetical protein
13_1_20cm_3_scaffold_759_3
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1687..2685)
-----------------
DNA (999bp)
protein (333aa)
Glycolate oxidase FAD binding subunit n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VZJ4_9ACTO
Glycolate oxidase FAD binding subunit {ECO:0000313|EMBL:AGZ42192.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuli
glycolate oxidase FAD binding subunit
13_1_20cm_3_scaffold_759_4
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2814..4262)
-----------------
DNA (1449bp)
protein (483aa)
Glycolate oxidase {ECO:0000313|EMBL:AEV83972.1}; EC=1.1.3.15 {ECO:0000313|EMBL:AEV83972.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" sour
glcD; glycolate oxidase (EC:1.1.3.15)
FAD-binding protein n=1 Tax=Actinoplanes globisporus RepID=UPI000371CD06 rbh
13_1_20cm_3_scaffold_759_5
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4259..5833)
-----------------
DNA (1575bp)
protein (525aa)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;"
malate synthase (EC:2.3.3.9)
malate synthase n=1 Tax=Nocardiopsis gilva RepID=UPI00034BF3B2 rbh
13_1_20cm_3_scaffold_759_6
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5916..6170
-----------------
DNA (255bp)
protein (85aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QGX8_CATAD
Uncharacterized protein {ECO:0000313|EMBL:ACU76828.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein
13_1_20cm_3_scaffold_759_7
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6167..7015
-----------------
DNA (849bp)
protein (283aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QGX7_CATAD
Uncharacterized protein {ECO:0000313|EMBL:ACU76827.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein
13_1_20cm_3_scaffold_759_8
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7274..8380
-----------------
DNA (1107bp)
protein (369aa)
ABC transporter substrate-binding protein n=1 Tax=Saccharomonospora saliphila RepID=UPI00036BB0BA
Ribose ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) {ECO:0000313|EMBL:CEL22515.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kib
substrate-binding component of ABC transporter
13_1_20cm_3_scaffold_759_9
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8576..11680
-----------------
DNA (3105bp)
protein (1035aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00035F3B92
Uncharacterized protein {ECO:0000313|EMBL:EWT07259.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5
carbohydrate-binding protein
13_1_20cm_3_scaffold_759_10
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11695..12663)
-----------------
DNA (969bp)
protein (323aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2P5Z4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWT05771.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5
hypothetical protein
13_1_20cm_3_scaffold_759_11
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12671..14944)
-----------------
DNA (2274bp)
protein (758aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00035F3B92 rbh
Uncharacterized protein {ECO:0000313|EMBL:EWT07259.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5
carbohydrate-binding protein
13_1_20cm_3_scaffold_759_12
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15142..15837
-----------------
DNA (696bp)
protein (232aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MCL8_9ACTO
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACU77278.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenu
LuxR family transcriptional regulator
13_1_20cm_3_scaffold_759_13
Actinomadura madurae, Actinomadura, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

15998..17368
-----------------
DNA (1371bp)
protein (457aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MVP9_9ACTO
13_1_20cm_3_scaffold_759_14
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17365..18432
-----------------
DNA (1068bp)
protein (356aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PA97_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:KDN72549.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
hypothetical protein
13_1_20cm_3_scaffold_759_15
unknown

Not on your lists

comp(18632..19084)
-----------------
DNA (453bp)
protein (151aa)
Uncharacterized protein id=24536405 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_1_20cm_3_scaffold_759_16
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19363..19794
-----------------
DNA (432bp)
protein (144aa)
Uncharacterized protein (Fragment) n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MDX1_9ACTO
Putative polysaccharide biosynthesis protein {ECO:0000313|EMBL:KDN83142.1}; TaxID=1348663 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora
putative polysaccharide biosynthesis protein
13_1_20cm_3_scaffold_759_17
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19798..20760
-----------------
DNA (963bp)
protein (321aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00036EFC6A
Uncharacterized protein {ECO:0000313|EMBL:EWT01757.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2447
13_1_20cm_3_scaffold_759_18
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20757..21983
-----------------
DNA (1227bp)
protein (409aa)
second mannosyl transferase (EC:2.-.-.-)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MXR8_9ACTO rbh
Mannosyl transferase {ECO:0000313|EMBL:KJK10516.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
13_1_20cm_3_scaffold_759_19
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21974..23407
-----------------
DNA (1434bp)
protein (478aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangi
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003749F84 rbh
RtcB; hypothetical protein
13_1_20cm_3_scaffold_759_20
unknown

Not on your lists

23418..23828
-----------------
DNA (411bp)
protein (137aa)

This feature has no annotations

13_1_20cm_3_scaffold_759_21
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23825..24910
-----------------
DNA (1086bp)
protein (362aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00035C635C
Uncharacterized protein {ECO:0000313|EMBL:EWT01755.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2447
13_1_20cm_3_scaffold_759_22
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24907..26226
-----------------
DNA (1320bp)
protein (440aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2P4P4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWT01754.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2447
13_1_20cm_3_scaffold_759_23
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26223..27497
-----------------
DNA (1275bp)
protein (425aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2P4P4_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EWT01753.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2447
polysaccharide biosynthesis protein
13_1_20cm_3_scaffold_759_24
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27494..28528
-----------------
DNA (1035bp)
protein (345aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00037BD9AA
Uncharacterized protein {ECO:0000313|EMBL:KJK10448.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
hypothetical protein
13_1_20cm_3_scaffold_759_25
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28535..29275
-----------------
DNA (741bp)
protein (247aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PBJ6_9ACTO
Sugar transferase {ECO:0000313|EMBL:EWT01723.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
sugar transferase
13_1_20cm_3_scaffold_759_26
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29265..30845)
-----------------
DNA (1581bp)
protein (527aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MXR4_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EWT01722.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2447
Rieske (2Fe-2S) domain-containing protein rbh
Displaying 26 items

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