ggKbase home page

13_1_20cm_3_scaffold_1115_4

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(2530..3327)

Top 3 Functional Annotations

Value Algorithm Source
regulatory protein n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI0003664335 similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 250.0
  • Bit_score: 256
  • Evalue 2.60e-65
Transcriptional regulator, SARP family {ECO:0000313|EMBL:ADP79390.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 251.0
  • Bit_score: 254
  • Evalue 1.40e-64
SARP family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 251.0
  • Bit_score: 254
  • Evalue 2.80e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGCTTCAGTTCAAGGTCATGGGTCCGCTGGAGGTGCTCCACGACGGCCGGGACCGCACCCCGACGCCACCGAAGGTGCGCCAGGTGCTCGCGTTGCTGCTGTTGCGCGCGAACCAGGTCGTCGCGGTCGACGCGCTGATCGAAGAGGTGTGGGGCGAGGACCCGCCGCTGAGCGCGGTCGGCACCATGCAGACGTACATCCACCAGCTGCGCAAGCTGTTCGAGCGGCCGGGTACCCAGCTGATGCGCAAGCCGCCCGGGTACCTGATGGCGGTACCGCCGAGCCAGCTCGACGCGCACACCTTCGAAATGCTGTCCTGGCAAGGCCGGCAGCTGCTGGACAGCGGCCGGCCGGAACAGGCCGGCCGGGTACTGCGCCAGGCCCTCGCGATGTGGACCGGGCCGTGCCTCGCCAACGTGGTGCCGGGCCGGTTGCTGGAGGCGCACGCGGTGCACCTGGAGGAGCAGCGGATGCGCACGCTGGAACTGCGCATCCAGGCCGACGCCGAGATCGGGCTGCACCGCGACCTGGTCGGCGAGATGCGCTCGCTGGTGATGAGCTACCCGCTCAACGAGTGGTTCCACGGCCAGCTCATCGTCGCGCTCAGCCGCAGCGGCCGCCGGGGGGAGGCGCTGCAGGCCTACCAGAACCTGCGCGAGTTGCTGTGCAACCAGCTCGGCCTGGAGCCGCAGCCGGACCTGCAACTGTTGCAGCGCGAGGTGTTGAGCAACGGGATCCCCGAGTCGGCCGTGTTCCGGCCCTACCGGCGCCGGCTCGCCGCCGTCGCTGCCGCCTGA
PROTEIN sequence
Length: 266
MLQFKVMGPLEVLHDGRDRTPTPPKVRQVLALLLLRANQVVAVDALIEEVWGEDPPLSAVGTMQTYIHQLRKLFERPGTQLMRKPPGYLMAVPPSQLDAHTFEMLSWQGRQLLDSGRPEQAGRVLRQALAMWTGPCLANVVPGRLLEAHAVHLEEQRMRTLELRIQADAEIGLHRDLVGEMRSLVMSYPLNEWFHGQLIVALSRSGRRGEALQAYQNLRELLCNQLGLEPQPDLQLLQREVLSNGIPESAVFRPYRRRLAAVAAA*