ggKbase home page

13_1_20cm_3_scaffold_1115

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1115_1
unknown

Not on your lists

comp(1..69)
DNA (69bp) protein (23aa)

This feature has no annotations

13_1_20cm_3_scaffold_1115_2
Actinomadura kijaniata, Actinomadura, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

503..1477
DNA (975bp) protein (325aa)
FAD-dependent oxidoreductase n=1 Tax=Actinomadura kijaniata RepID=B3TMQ4_9ACTO
FAD-dependent oxidoreductase {ECO:0000313|EMBL:ACB46484.1}; TaxID=46161 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Actinomadura.;" source="Actinomadura kijaniata.;"
hypothetical protein
13_1_20cm_3_scaffold_1115_3
Streptomyces sp. SF2575, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1594..2523
DNA (930bp) protein (310aa)
SsfF n=1 Tax=Streptomyces sp. SF2575 RepID=D6MSX5_9ACTO
SsfF {ECO:0000313|EMBL:ADE34525.1}; TaxID=746675 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. SF2575.;"
aldo-keto reductase
13_1_20cm_3_scaffold_1115_4
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2530..3327)
DNA (798bp) protein (266aa)
regulatory protein n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI0003664335
Transcriptional regulator, SARP family {ECO:0000313|EMBL:ADP79390.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SARP family transcriptional regulator
13_1_20cm_3_scaffold_1115_5
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3654..4484
DNA (831bp) protein (277aa)
Putative UbiA prenyltransferase n=1 Tax=Rhodococcus fascians D188 RepID=G8JYX5_RHOFA
Uncharacterized protein {ECO:0000313|EMBL:ETK35447.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
hypothetical protein
13_1_20cm_3_scaffold_1115_6
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4679..5758
DNA (1080bp) protein (360aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp.
Histidine kinase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J3Q4_FRASU
histidine kinase
13_1_20cm_3_scaffold_1115_7
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5755..6456
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00035D2AEF
Response regulator receiver {ECO:0000313|EMBL:ETK35449.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-
LuxR family transcriptional regulator
13_1_20cm_3_scaffold_1115_8
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7221..7685)
DNA (465bp) protein (155aa)
RubF n=1 Tax=Streptomyces collinus RepID=Q9FD16_STRCU
RubF {ECO:0000313|EMBL:AAG03070.2}; TaxID=42684 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus.;"
RubF
13_1_20cm_3_scaffold_1115_9
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7688..8011)
DNA (324bp) protein (108aa)
Putative cyclaseI n=1 Tax=Streptomyces collinus RepID=Q9FD21_STRCU
Putative cyclaseI {ECO:0000313|EMBL:AAG03065.2}; TaxID=42684 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus.;"
hypothetical protein
13_1_20cm_3_scaffold_1115_10
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8170..9222
DNA (1053bp) protein (351aa)
O-methyltransferase n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7FGV9_9ACTO
O-methyltransferase {ECO:0000313|EMBL:ELP70429.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
tcmN; Multifunctional cyclase-dehydratase-3-O-methyl transferase TcmN
13_1_20cm_3_scaffold_1115_11

Not on your lists

9294..10364
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Streptomyces sp. MspMP-M5 RepID=UPI00037B558C rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AHX24686.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
galE; UDP-glucose 4-epimerase rbh
13_1_20cm_3_scaffold_1115_12
unknown

Not on your lists

10440..10886
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_20cm_3_scaffold_1115_13
Streptomyces sp. SirexAA-E, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10883..11788
DNA (906bp) protein (302aa)
ABC transporter related protein n=1 Tax=Streptomyces sp. SirexAA-E RepID=G2NAZ2_9ACTO
ABC transporter related protein {ECO:0000313|EMBL:AEN09702.1}; TaxID=862751 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain Sir
ABC transporter-like protein
13_1_20cm_3_scaffold_1115_14
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11799..12551
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6JTD2_STRNV
Uncharacterized protein {ECO:0000313|EMBL:EST22376.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
ABC transporter integral membrane protein
13_1_20cm_3_scaffold_1115_15
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12553..13554)
DNA (1002bp) protein (334aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="
spore coat protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI0003827D41 rbh
dTDP-glucose 4,6-dehydratase rbh
13_1_20cm_3_scaffold_1115_16
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13711..15096
DNA (1386bp) protein (462aa)
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase n=1 Tax=Streptomyces gancidicus BKS 13-15 RepID=M3CPE6_9ACTO rbh
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:EMF25908.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source
FAD-binding monooxygenase
13_1_20cm_3_scaffold_1115_17
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15093..15524)
DNA (432bp) protein (144aa)
Regulatory protein MarR n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IV28_FRASU
Regulatory protein MarR {ECO:0000313|EMBL:ADP80048.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
MarR family transcriptional regulator
13_1_20cm_3_scaffold_1115_18
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15524..15658)
DNA (135bp) protein (45aa)
Polyketide cyclase/dehydrase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IV29_FRASU
Polyketide cyclase/dehydrase {ECO:0000313|EMBL:ADP80049.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
polyketide cyclase/dehydrase
Displaying 18 items

View Taxonomy