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13_1_20cm_3_scaffold_12032_3

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(844..1239)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GYK2_ACTM4 similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 131.0
  • Bit_score: 193
  • Evalue 1.00e-46
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis ( UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 131.0
  • Bit_score: 192
  • Evalue 4.20e-46
rplR; 50S ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 131.0
  • Bit_score: 192
  • Evalue 8.40e-47

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Taxonomy

Actinoplanes missouriensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 396
GTGACTGCCCTTTTGCTTAAGCGGCGCAGCGGCGGCGGGCCGGCTCTCGTGCGCCGGGTCGGCAAGGCGCGCCGGCACTTCCGGGTCCGCAAGAACGTCTTCGGTACCCCGACCCGGCCGCGCCTGGTCGTCACCCGGTCACTGCGGCACATCGTCGCGCAGATCGTCGACGACACCCAGGGTCGTACCCTCGCCTCGGCGTCCAGCCTGGACAGCACCCTGCGGGGTGCCGAGGGGGCCAAGAGCGAGCAGGCCCGCAGGGTCGGCGAGCTCCTGGCCGGCCGCGCCCGGGAGGCGGGCATCAGCAAGGTCGTCTTCGACCGCGGTGGCAACAAGTACGCCGGGCGGATCGCCGCCCTCGCGGACGCCGCCCGCGAAGCCGGACTCGAGTTCTAG
PROTEIN sequence
Length: 132
VTALLLKRRSGGGPALVRRVGKARRHFRVRKNVFGTPTRPRLVVTRSLRHIVAQIVDDTQGRTLASASSLDSTLRGAEGAKSEQARRVGELLAGRAREAGISKVVFDRGGNKYAGRIAALADAAREAGLEF*