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13_1_20cm_3_scaffold_12032

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_12032_1
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(17..199)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Micromonospora sp. CNB394 RepID=UPI00037792C8
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" sou
rpmD; 50S ribosomal protein L30
13_1_20cm_3_scaffold_12032_2
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(205..828)
DNA (624bp) protein (208aa)
30S ribosomal protein S5 n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000367B648 rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" sour
30S ribosomal protein S5 rbh
13_1_20cm_3_scaffold_12032_3
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(844..1239)
DNA (396bp) protein (132aa)
50S ribosomal protein L18 n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GYK2_ACTM4
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (
rplR; 50S ribosomal protein L18
13_1_20cm_3_scaffold_12032_4
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1271..1813)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VU17_9ACTO rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" sourc
rplF; 50S ribosomal protein L6 rbh
13_1_20cm_3_scaffold_12032_5
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1830..2063)
DNA (234bp) protein (78aa)
30S ribosomal protein S8 n=1 Tax=Longispora albida RepID=UPI000364A6B0
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
rpsH; 30S ribosomal protein S8
13_1_20cm_3_scaffold_12032_6
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(2223..2408)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LC60_9ACTO
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospor
30S ribosomal protein S14
13_1_20cm_3_scaffold_12032_7
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(2410..2976)
DNA (567bp) protein (189aa)
50S ribosomal protein L5 n=1 Tax=Actinoplanes globisporus RepID=UPI00037DB708
50S ribosomal protein L5 {ECO:0000255|HAMAP-Rule:MF_01333}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain AT
rplE; 50S ribosomal protein L5
13_1_20cm_3_scaffold_12032_8
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(2976..3227)
DNA (252bp) protein (84aa)
50S ribosomal protein L24 n=1 Tax=Salinispora pacifica RepID=UPI000369643F
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;
50S ribosomal protein L24
13_1_20cm_3_scaffold_12032_9
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3230..3598)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=6 Tax=Micromonosporaceae RepID=RL14_SALAI
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" sou
50S ribosomal protein L14
13_1_20cm_3_scaffold_12032_10
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3652..3918)
DNA (267bp) protein (89aa)
30S ribosomal protein S17 n=1 Tax=Catelliglobosispora koreensis RepID=UPI00037E1A41
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source
30S ribosomal protein S17
13_1_20cm_3_scaffold_12032_11
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3915..4151)
DNA (237bp) protein (79aa)
50S ribosomal protein L29 n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VQH5_9ACTO
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DS
50S ribosomal protein L29
13_1_20cm_3_scaffold_12032_12
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(4151..4576)
DNA (426bp) protein (142aa)
50S ribosomal protein L16 n=1 Tax=Actinoplanes globisporus RepID=UPI000378EAF8
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" sour
rplP; 50S ribosomal protein L16
13_1_20cm_3_scaffold_12032_13
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(4580..5341)
DNA (762bp) protein (254aa)
30S ribosomal protein S3 n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RAX2_9ACTO rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 391
30S ribosomal protein S3
13_1_20cm_3_scaffold_12032_14
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5938..6219)
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=3 Tax=Micromonospora RepID=D9TF56_MICAI
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;
30S ribosomal protein S19
13_1_20cm_3_scaffold_12032_15
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6223..6993)
DNA (771bp) protein (257aa)
50S ribosomal protein L2 n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LC70_9ACTO
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str.
ribosomal protein L2, bacterial/organellar
13_1_20cm_3_scaffold_12032_16
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7006..7308)
DNA (303bp) protein (101aa)
50S ribosomal protein L23 n=1 Tax=Salinispora arenicola (strain CNS-205) RepID=A8M527_SALAI
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain
50S ribosomal protein L25
13_1_20cm_3_scaffold_12032_17
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7305..7961)
DNA (657bp) protein (219aa)
50S ribosomal protein L4 n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VU84_9ACTO rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM
rplD; 50S ribosomal protein L4
13_1_20cm_3_scaffold_12032_18
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7963..8622)
DNA (660bp) protein (220aa)
50S ribosomal protein L3 n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LFG9_9ACTO rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source
rplC; 50S ribosomal protein L3 rplC
13_1_20cm_3_scaffold_12032_19
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8634..8942)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=11 Tax=Micromonosporaceae RepID=RS10_SALAI
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain A
30S ribosomal protein S10
13_1_20cm_3_scaffold_12032_20
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9206..10399)
DNA (1194bp) protein (398aa)
elongation factor Tu n=1 Tax=Micromonospora sp. CNB394 RepID=UPI0003604159 rbh
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales
translation elongation factor tu rbh
13_1_20cm_3_scaffold_12032_21
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10526..10699)
DNA (174bp) protein (58aa)
elongation factor G n=1 Tax=Catelliglobosispora koreensis RepID=UPI00035F16CF
Elongation factor G {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000255|HAMAP-Rule:MF_00054};; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora
elongation factor G
Displaying 21 items

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