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13_1_20cm_3_scaffold_1024

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1024_1
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..402
DNA (402bp) protein (134aa)
Diguanylate cyclase {ECO:0000313|EMBL:KGI77432.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.
pleD; pleD gene product; K02488 two-component system, cell cycle response regulator id=12554452 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_20cm_3_scaffold_1024_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(813..1967)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FCAF7 rbh
FAD dependent oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
FAD dependent oxidoreductase
13_1_20cm_3_scaffold_1024_3
unknown

Not on your lists

comp(1964..2440)
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_20cm_3_scaffold_1024_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2508..5246
DNA (2739bp) protein (913aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INL6_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF41534.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
hypothetical protein
13_1_20cm_3_scaffold_1024_5
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(5348..6109)
DNA (762bp) protein (254aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=171953 spec
5'-nucleotidase SurE n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFE8_9BACT
stationary-phase survival protein SurE
13_1_20cm_3_scaffold_1024_trna_1
unknown

Not on your lists

comp(6199..6272)
DNA (74bp)
transferRNA
13_1_20cm_3_scaffold_1024_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(6346..6750)
DNA (405bp) protein (135aa)
MerR family transcriptional regulator n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6C43D
regulatory protein MerR Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
MerR family transcriptional regulator
13_1_20cm_3_scaffold_1024_7
unknown

Not on your lists

comp(6713..6844)
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_20cm_3_scaffold_1024_8
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(6989..8482)
DNA (1494bp) protein (498aa)
GTPase Der n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NYN2_GRAMM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|SAAS:SAAS00038180}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales
ribosome-associated GTPase EngA
13_1_20cm_3_scaffold_1024_9
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8662..9018
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036892D3
ArsR family transcriptional regulator Tax=RBG_16_Gamma2_60_9_curated
ArsR family transcriptional regulator
13_1_20cm_3_scaffold_1024_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9028..9879
DNA (852bp) protein (284aa)
type 11 methyltransferase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Methyltransferase type 11 id=4476340 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
arsM; arsenite S-adenosylmethyltransferase
13_1_20cm_3_scaffold_1024_11
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10086..10382)
DNA (297bp) protein (99aa)
TonB family protein; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
13_1_20cm_3_scaffold_1024_12
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11237..11578
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI00037B02B5
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CQR52359.1}; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillu
RNA polymerase, sigma-24 subunit, ECF subfamily
Displaying 13 items

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