ggKbase home page

13_1_20cm_3_scaffold_1104

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1104_1
unknown

Not on your lists

comp(2..235)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_20cm_3_scaffold_1104_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(441..1373)
DNA (933bp) protein (311aa)
thiosulfate sulfurtransferase (EC:2.8.1.1)
Thiosulfate sulfurtransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SE5_SOLUE
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Sol
13_1_20cm_3_scaffold_1104_3
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1511..2932
DNA (1422bp) protein (474aa)
amidohydrolase n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037DDA42
Amidohydrolase {ECO:0000313|EMBL:AEU36487.1}; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (str
amidohydrolase
13_1_20cm_3_scaffold_1104_4
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3051..3905
DNA (855bp) protein (285aa)
ureidoglycolate lyase n=1 Tax=Schlesneria paludicola RepID=UPI00029AAA09
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:ETN95139.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica A
ureidoglycolate lyase
13_1_20cm_3_scaffold_1104_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

4084..4938
DNA (855bp) protein (285aa)
amidohydrolase 2; K07046 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
amidohydrolase 2; K07046 id=12554612 bin=CNBR_ACIDO species=Paenibacillus curdlanolyticus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
amidohydrolase
13_1_20cm_3_scaffold_1104_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4958..6673
DNA (1716bp) protein (572aa)
Altronate dehydratase {ECO:0000313|EMBL:CDM65034.1}; EC=4.2.1.7 {ECO:0000313|EMBL:CDM65034.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrin
D-galactarate dehydratase/altronate hydrolase family protein, insertion n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F5U9_ACIC5
D-galactarate dehydratase/altronate hydrolase family protein, insertion
13_1_20cm_3_scaffold_1104_7
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6649..7467
DNA (819bp) protein (273aa)
short-chain dehydrogenase n=1 Tax=Spirosoma luteum RepID=UPI0003732561
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:ACO32639.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="
short chain dehydrogenase/reductase family oxidoreductase
13_1_20cm_3_scaffold_1104_8
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

7471..8253
DNA (783bp) protein (261aa)
short chain dehydrogenase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=GWC2_Ignavibacteria_rel_36_12_curated
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F5V1_ACIC5
short chain dehydrogenase
13_1_20cm_3_scaffold_1104_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8266..8985
DNA (720bp) protein (240aa)
L-fucose transporter n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCA7_CHIPD
L-fucose transporter {ECO:0000313|EMBL:ACU59490.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis
L-fucose transporter
13_1_20cm_3_scaffold_1104_10
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8994..9512
DNA (519bp) protein (173aa)
L-fucose transporter n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y269_9SPHI
L-fucose transporter {ECO:0000313|EMBL:EHQ26726.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibact
L-fucose transporter
13_1_20cm_3_scaffold_1104_11
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9509..9847
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029A6F4C
L-fucose mutarotase {ECO:0000313|EMBL:KIA92047.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheen
hypothetical protein
Displaying 11 items

View Taxonomy