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13_1_20cm_3_scaffold_126

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_126_1

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comp(1..384)
DNA (384bp) protein (128aa)
50S ribosomal subunit protein L9 n=1 Tax=mine drainage metagenome RepID=E6PX70_9ZZZZ
50S ribosomal subunit protein L9 {ECO:0000313|EMBL:CBH99529.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
50S ribosomal protein L9
13_1_20cm_3_scaffold_126_2
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(426..932)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003735E91
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strai
30S ribosomal protein S18
13_1_20cm_3_scaffold_126_3
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(1047..1463)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035F2CB1
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
rpsF; 30S ribosomal protein S6
13_1_20cm_3_scaffold_126_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(1513..2109)
DNA (597bp) protein (199aa)
Peptidyl-tRNA hydrolase {ECO:0000255|HAMAP-Rule:MF_00083}; Short=PTH {ECO:0000255|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000255|HAMAP-Rule:MF_00083};; TaxID=234267 species="Bacteria; Acidobacteria;
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=PTH_SOLUE
13_1_20cm_3_scaffold_126_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(2166..2930)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035F6BE4
50S ribosomal protein L25P; K02897 large subunit ribosomal protein L25 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
50S ribosomal protein L25
13_1_20cm_3_scaffold_126_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(2992..3936)
DNA (945bp) protein (315aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Ribose-phosphate pyrophosphokinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHW0_KORVE
ribose-phosphate pyrophosphokinase
13_1_20cm_3_scaffold_126_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(4061..4963)
DNA (903bp) protein (301aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; Short=CMK {ECO:0000255|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000255|HAMAP-Rule:MF_00061};; 4-(cytidine-5'-dipho
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=ISPE_SOLUE
13_1_20cm_3_scaffold_126_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(4972..7092)
DNA (2121bp) protein (707aa)
Tetratricopeptide repeat protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHP7_KORVE
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ABF43603.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="
hypothetical protein
13_1_20cm_3_scaffold_126_9
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(7250..8821)
DNA (1572bp) protein (524aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F5W1_ACIC5
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acid
13_1_20cm_3_scaffold_126_10
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(8912..9523)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV26_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_1_20cm_3_scaffold_126_11
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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9688..11118
DNA (1431bp) protein (477aa)
L-seryl-tRNA(Sec) selenium transferase; K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020K6_SOLUE
13_1_20cm_3_scaffold_126_12
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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11236..11601
DNA (366bp) protein (122aa)
Glr1418 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NKQ9_GLOVI
Glr1418 protein {ECO:0000313|EMBL:BAC89359.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
hypothetical protein
13_1_20cm_3_scaffold_126_13
unknown

Not on your lists

11691..11909
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_20cm_3_scaffold_126_14
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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12105..13178
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000369382B rbh
theronine dehydrogenase-like Zn-dependent dehydrogenase Tax=RBG_13_Deltaproteobacteria_61_14_curated
alcohol dehydrogenase
13_1_20cm_3_scaffold_126_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(13165..13932)
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QN2_SOLUE
hypothetical protein; K06898 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_3_scaffold_126_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

14032..14667
DNA (636bp) protein (212aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRZ9_KORVE
polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
13_1_20cm_3_scaffold_126_17
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

14687..15568
DNA (882bp) protein (294aa)
4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
4-hydroxybenzoate polyprenyltransferase, putative n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKI7_KORVE
4-hydroxybenzoate polyprenyltransferase
13_1_20cm_3_scaffold_126_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

15587..16735
DNA (1149bp) protein (383aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F311_ACIC5
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_3_scaffold_126_19
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

17058..17387
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAT6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK40345.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
13_1_20cm_3_scaffold_126_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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17430..18230
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003807895
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89961.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 20 items

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