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13_1_20cm_3_scaffold_275

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_275_1
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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129..1064
DNA (936bp) protein (312aa)
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:ABQ92156.1}; EC=5.3.1.8 {ECO:0000313|EMBL:ABQ92156.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Rosei
mannose-6-phosphate isomerase (EC:5.3.1.8)
Mannose-6-phosphate isomerase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZV3_ROSS1
13_1_20cm_3_scaffold_275_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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1077..2189
DNA (1113bp) protein (371aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Mannose-6-phosphate isomerase, type 2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU75_KORVE
mannose-1-phosphate guanylyltransferase
13_1_20cm_3_scaffold_275_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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2277..3686
DNA (1410bp) protein (470aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V5K0_TERSS
phosphoglucosamine mutase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
13_1_20cm_3_scaffold_275_4
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3695..4054
DNA (360bp) protein (120aa)
Mannose-6-phosphate isomerase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FU89_9CLOT
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:EMS73881.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termiti
hypothetical protein
13_1_20cm_3_scaffold_275_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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4092..4973
DNA (882bp) protein (294aa)
yddE; isomerase (EC:5.1.-.-); K06998 Tax=RBG_16_Euryarchaeota_68_12_curated
Phenazine biosynthesis protein PhzF family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVB5_9CHLR
phenazine biosynthesis protein PhzF family
13_1_20cm_3_scaffold_275_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5246..5887)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7U6_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:AEW03390.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
hypothetical protein
13_1_20cm_3_scaffold_275_7
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(6026..6400)
DNA (375bp) protein (125aa)
N utilization substance protein B homolog n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=NUSB_KORVE
NusB antitermination factor; K03625 N utilization substance protein B Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
NusB antitermination factor
13_1_20cm_3_scaffold_275_8
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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comp(6435..6962)
DNA (528bp) protein (176aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Geobacter sulfurreducens RepID=RISB_GEOSL
ribH; 6,7-dimethyl-8-ribityllumazine synthase
13_1_20cm_3_scaffold_275_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(7042..7824)
DNA (783bp) protein (261aa)
short chain enoyl-CoA hydratase; K01715 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Short chain enoyl-CoA hydratase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISD5_KORVE
short chain enoyl-CoA hydratase
13_1_20cm_3_scaffold_275_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(7926..8807)
DNA (882bp) protein (294aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ABF40214.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ABF40214.1};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobact
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISD6_KORVE
3-hydroxyacyl-CoA dehydrogenase
13_1_20cm_3_scaffold_275_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8979..10166)
DNA (1188bp) protein (396aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=uncultured marine group II euryarchaeote EF100_57A08 RepID=A9QP30_9EURY id=5224563 bin=16ft_combo_ws3_JS1 species=uncultured marine group II euryarchaeote EF100_57A08 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_20cm_3_scaffold_275_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(10850..13471)
DNA (2622bp) protein (874aa)
Diguanylate cyclase with GAF sensor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU62_KORVE
diguanylate cyclase with GAF sensor Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
GAF sensor-containing diguanylate cyclase
13_1_20cm_3_scaffold_275_13
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13724..14506
DNA (783bp) protein (261aa)
UPI0003CEAAA4 related cluster n=2 Tax=unknown RepID=UPI0003CEAAA4
Uncharacterized protein {ECO:0000313|EMBL:CDX23187.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
methylase
13_1_20cm_3_scaffold_275_14
Desulfurella acetivorans, Desulfurella, Desulfurellales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14535..15581)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036DF419
Membrane protein {ECO:0000313|EMBL:AHF97492.1}; TaxID=694431 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfurellales; Desulfurellaceae; Desulfurella.;" source="Desulfurella acetivorans
membrane protein
Displaying 14 items

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