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13_1_20cm_3_scaffold_411

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_411_1
unknown

Not on your lists

308..619
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_20cm_3_scaffold_411_2
unknown

Not on your lists

comp(895..1044)
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_20cm_3_scaffold_411_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1041..1388)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL00_KORVE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_20cm_3_scaffold_411_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1399..1980)
DNA (582bp) protein (194aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NS7_SOLUE
ECF subfamily RNA polymerase sigma-24 factor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_3_scaffold_411_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

2576..2941
DNA (366bp) protein (122aa)
Anti-sigma factor antagonist n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INN3_KORVE
anti-anti-sigma factor; K04749 anti-sigma B factor antagonist Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
anti-sigma-factor antagonist
13_1_20cm_3_scaffold_411_6
unknown

Not on your lists

3316..3621
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_20cm_3_scaffold_411_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4145..4510
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000363A76D
YCII-related protein {ECO:0000313|EMBL:AHG88791.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
YCII-related protein
13_1_20cm_3_scaffold_411_8
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4806..6254)
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037398B2
Leucine-rich repeat, ribonuclease inhibitor subtype {ECO:0000313|EMBL:CCH03425.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella
Leucine-rich repeat, ribonuclease inhibitor subtype
13_1_20cm_3_scaffold_411_9
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(6265..6909)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036D222F
NHL repeat-containing protein {ECO:0000313|EMBL:AIE86096.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas
NHL repeat-containing protein
13_1_20cm_3_scaffold_411_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(6906..7322)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036D222F
NHL repeat-containing protein {ECO:0000313|EMBL:AIE86096.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas
NHL repeat-containing protein
13_1_20cm_3_scaffold_411_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7319..8869)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ68_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57986.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
hypothetical protein
13_1_20cm_3_scaffold_411_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8886..12155)
DNA (3270bp) protein (1090aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D905_SINAD rbh
Uncharacterized protein {ECO:0000313|EMBL:AGA25350.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
hypothetical protein
13_1_20cm_3_scaffold_411_13
unknown

Not on your lists

12412..12753
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_20cm_3_scaffold_411_14

Not on your lists

12913..13353
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D39D1F
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49242.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_3_scaffold_411_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

13450..14673
DNA (1224bp) protein (408aa)
Methionine synthase (B12-independent) {ECO:0000313|EMBL:ABJ83665.1}; EC=2.1.1.14 {ECO:0000313|EMBL:ABJ83665.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacter
methionine synthase (B12-independent) (EC:2.1.1.14)
Methionine synthase (B12-independent) n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024B1_SOLUE
13_1_20cm_3_scaffold_411_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14985..15830
DNA (846bp) protein (282aa)
phytanoyl-CoA dioxygenase n=1 Tax=Afipia birgiae RepID=UPI00030BE5D9 rbh
Uncharacterized protein {ECO:0000313|EMBL:CAN93484.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
hypothetical protein
13_1_20cm_3_scaffold_411_17
unknown

Not on your lists

16051..16290
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_20cm_3_scaffold_411_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(16614..17495)
DNA (882bp) protein (294aa)
oxidoreductase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B435C2 rbh
Oxidoreductase {ECO:0000313|EMBL:ABJ82076.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibact
oxidoreductase
13_1_20cm_3_scaffold_411_19
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

comp(17714..19426)
DNA (1713bp) protein (571aa)
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
hypothetical protein id=24486796 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
hypothetical protein
13_1_20cm_3_scaffold_411_20
Pseudomonas sp. GM79, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20730..22721
DNA (1992bp) protein (664aa)
PQQ-dependent dehydrogenase, methanol/ethanol family n=1 Tax=Pseudomonas sp. GM79 RepID=J3IKJ6_9PSED rbh
PQQ-dependent dehydrogenase, methanol/ethanol family {ECO:0000313|EMBL:EJN28788.1}; Flags: Precursor;; TaxID=1144338 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomona
PQQ-dependent dehydrogenase
13_1_20cm_3_scaffold_411_21
unknown

Not on your lists

22889..23047
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_20cm_3_scaffold_411_22
unknown

Not on your lists

comp(23044..23229)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_20cm_3_scaffold_411_23
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

23363..24199
DNA (837bp) protein (279aa)
NADP-dependent oxidoreductase domain protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F363_SPICH
NADP-dependent oxidoreductase domain-containing protein Tax=RBG_13_Caldithrix_44_9_curated
NADP-dependent oxidoreductase domain-containing protein
13_1_20cm_3_scaffold_411_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(24675..26387)
DNA (1713bp) protein (571aa)
Peptidase M28 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITI9_KORVE rbh
Peptidase M28 {ECO:0000313|EMBL:ABF39811.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
peptidase M28
Displaying 24 items

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