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13_1_20cm_3_scaffold_5555

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_5555_1
unknown

Not on your lists

comp(3..80)
DNA (78bp) protein (26aa)

This feature has no annotations

13_1_20cm_3_scaffold_5555_2
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77..418)
DNA (342bp) protein (114aa)
Tax=RBG_13_Deltaproteobacteria_51_10_curated
13_1_20cm_3_scaffold_5555_3
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(376..1488)
DNA (1113bp) protein (371aa)
Transposase family protein n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=G4EF48_THECK
Uncharacterized protein {ECO:0000313|EMBL:KIE13826.1}; Flags: Fragment;; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB52
transposase family protein
13_1_20cm_3_scaffold_5555_4
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2346..2753)
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIW9_DESK7
Uncharacterized protein {ECO:0000313|EMBL:AEG15092.1}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (
hypothetical protein
13_1_20cm_3_scaffold_5555_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2897..4510)
DNA (1614bp) protein (538aa)
Putative cysteine ligase BshC {ECO:0000255|HAMAP-Rule:MF_01867}; EC=6.-.-.- {ECO:0000255|HAMAP-Rule:MF_01867};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
UPF0747 protein Acid345_2181 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Y2181_KORVE
hypothetical protein
13_1_20cm_3_scaffold_5555_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(4570..5466)
DNA (897bp) protein (299aa)
Dihydrodipicolinate synthase (EC:4.2.1.52) Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein id=8266651 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
dihydrodipicolinate synthetase
13_1_20cm_3_scaffold_5555_7
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6312..7331
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Ketogulonicigenium vulgare (strain WSH-001) RepID=F9Y9C1_KETVW
Uncharacterized protein {ECO:0000313|EMBL:AEM40103.1}; TaxID=759362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonic
hypothetical protein
13_1_20cm_3_scaffold_5555_8
R_Nitrospirae_40_19, Nitrospirae, Bacteria

Not on your lists

7603..7872
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_Nitrospirae_40_19_curated
Uncharacterized protein id=24601007 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Coraliomargarita sp. CAG:312 genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_1_20cm_3_scaffold_5555_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

8427..8651
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae subsp. pneumoniae DSM 30104 RepID=J2LWY6_KLEPN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
13_1_20cm_3_scaffold_5555_10
unknown

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comp(8740..8940)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_20cm_3_scaffold_5555_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8960..10045)
DNA (1086bp) protein (362aa)
carbamoyl-phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Carbamoyl-phosphate synthase small chain n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPK5_KORVE
carbamoyl-phosphate synthase small subunit
13_1_20cm_3_scaffold_5555_12
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10180..10872)
DNA (693bp) protein (231aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037FEFF2
peptidase S26A, signal peptidase I
13_1_20cm_3_scaffold_5555_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(11054..11725)
DNA (672bp) protein (224aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibactera
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003666200
16S ribosomal RNA methyltransferase RsmE
13_1_20cm_3_scaffold_5555_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(11804..12943)
DNA (1140bp) protein (380aa)
Chaperone protein DnaJ n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B33_SOLUE
molecular chaperone DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
molecular chaperone DnaJ
13_1_20cm_3_scaffold_5555_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(12962..13552)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI000367EFFE
heat shock protein GrpE; K03687 molecular chaperone GrpE Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
molecular chaperone GrpE
13_1_20cm_3_scaffold_5555_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(13582..14625)
DNA (1044bp) protein (348aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILK5_KORVE
heat shock gene repressor HrcA; K03705 heat-inducible transcriptional repressor Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
heat-inducible transcription repressor HrcA
13_1_20cm_3_scaffold_5555_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(14778..16280)
DNA (1503bp) protein (501aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Aldehyde dehydrogenase id=1250029 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria rbh
aldehyde dehydrogenase
13_1_20cm_3_scaffold_5555_18
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(16686..17984)
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00037F5953
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
amidohydrolase
Displaying 18 items

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