ggKbase home page

13_1_20cm_3_scaffold_2000_15

Organism: 13_1_20CM_3_Acidobacteria_58_11

partial RP 15 / 55 MC: 2 BSCG 12 / 51 ASCG 5 / 38
Location: comp(17489..19105)

Top 3 Functional Annotations

Value Algorithm Source
Thiamine pyrophosphate enzyme-like TPP binding region n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVS4_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 516.0
  • Bit_score: 475
  • Evalue 5.60e-131
Thiamine pyrophosphate enzyme-like TPP binding region {ECO:0000313|EMBL:ABG04504.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 516.0
  • Bit_score: 475
  • Evalue 7.80e-131
thiamine pyrophosphate enzyme-like TPP binding region similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 516.0
  • Bit_score: 475
  • Evalue 1.60e-131

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubrobacter xylanophilus → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1617
TTGAGCACAGTCAGAGAAGTTACCTACGAAGTTCTGCGCAATTTAGGGATGACGGTGATCTTCGGCAATCCCGGCTCGACGGAACTGCCCTTTCTCCGCGACATGCCCTCTGATTTTCGATATGTCCTGGGACTCCACGAGCGATGTGCGGCCGGCATGGCGCTTGGATACGCTCTGGCGCGGGGAAAAGCGGCTTTCGCCAACCTGCACTCCATCGCCAGCGCGGGCAATGGGCTCTCTGCCATCATCGATTCTGCCTACAGCCACGCACCGCTAGTGGTAACCACGGGGCAGCAGGATCGACGCCAGTTATTGGCAGAACCGTTTCTTGTGAGTCGGGCCGTGGATGTCGTCAAGCCTTACGTGAAATGGGCCTGCGAACCGCTGCGGGCGGAAGACGTACCTGCCGCCATTGTGCGCGGACATCACCTCGCCATGCAGCCGCCCAGGGGGCCGGTATTTATTTCCATCCCCATGGACGACTGGACGCACGAATGCCGGTCCATGGATTCCCGCGAAGTGCACCAAACTGTCTTGGCGGATCCTGCGGCGCTCGATGCCGTTGTTCGCGCACTAGATTCCAGCGGCAATCCCGCCATCGTCGCCGGCTCGCAGATTGAAGAAGACCAGGGTTGGCGGGAAGTTATCGAGCTCGCGGAACATCTCGACGTGGATGTTTATCAGGAGCCGATTGCGCCGAGGGTGGCGTTCCCGCGCACGCATCCCCTCTTTCGGGGAAATCTCTTGCCCGCGCAGCAGCCGCTGGCAGATCAGTTGGCCAGTTATGACACGATTGTCGTTCTGGGTGCGCCCATTTTTCTATATTACGCCTACGTGCCCGGAAATCCGATTCAGCCGGGAACGAAACTTTTCCAGATCACCAATTCCCCGCTCGACGCTTCCGGCGCACTCGCCGGAACCAGCATGGTCGGCAATCTCGCTTCCGCGATGAACTACATTCGCAGTCACACCAAGGCAAGAAAAAGAGATCCGATTTCGTCCCCATCACCGCCGCCAGAACCCCAACCCGAATATCCCATTACTCCTGGCTTTCTTTTCAGCGTCTTGGACCGCGTCATGCCGAGCGATGCGGTCATCTGTGAAGAATGTCCGTCATCAAAAGGGGATCTCGACCGGTATCTTCGCCTGGATCAGCCGGGCTCGTTCTATTCTGTGCGCACAGGAATTCTTGGCTTCGCTGTGCCTGCCTCGGTTGGTTTGCAACTTGCGCATCCGGAGAGGAGAGTGGTTTGCCCGGTCGGTGACGGCTCTATCCAGTACTCGATTCAAGCGCTTTGGAGCGCCGTGCAATACAACGCCGGGGTGATTTTTGTCGTGCTCCGGAATGCCGACTACTCCGCCTTGAAAGGGTTCTGCGATTTCACAAATGTCGGACGAAATGTTCCTGGCATGGACCTGCCTGGCATCAACATGGTGAAGCTCGCTCAGGGTTACGGCATGACGGCTCAGGAAGTCGACCGACCGGAAGATCTCGAGATTGCTCTGAGAGAAGCGTTCGCTGCGCCCGGACCGCGCTTGATCAGCGTCAATGTTACAAAAGGCGGACAGACTTGCATGGGGATGGATCAGTCCGTAAATCCGCCAAACTACGCCTGA
PROTEIN sequence
Length: 539
LSTVREVTYEVLRNLGMTVIFGNPGSTELPFLRDMPSDFRYVLGLHERCAAGMALGYALARGKAAFANLHSIASAGNGLSAIIDSAYSHAPLVVTTGQQDRRQLLAEPFLVSRAVDVVKPYVKWACEPLRAEDVPAAIVRGHHLAMQPPRGPVFISIPMDDWTHECRSMDSREVHQTVLADPAALDAVVRALDSSGNPAIVAGSQIEEDQGWREVIELAEHLDVDVYQEPIAPRVAFPRTHPLFRGNLLPAQQPLADQLASYDTIVVLGAPIFLYYAYVPGNPIQPGTKLFQITNSPLDASGALAGTSMVGNLASAMNYIRSHTKARKRDPISSPSPPPEPQPEYPITPGFLFSVLDRVMPSDAVICEECPSSKGDLDRYLRLDQPGSFYSVRTGILGFAVPASVGLQLAHPERRVVCPVGDGSIQYSIQALWSAVQYNAGVIFVVLRNADYSALKGFCDFTNVGRNVPGMDLPGINMVKLAQGYGMTAQEVDRPEDLEIALREAFAAPGPRLISVNVTKGGQTCMGMDQSVNPPNYA*