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13_1_20cm_3_scaffold_394_4

Organism: 13_1_20CM_3_Acidobacteria_58_11

partial RP 15 / 55 MC: 2 BSCG 12 / 51 ASCG 5 / 38
Location: 2293..2760

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor, ECF subfamily n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2Z9X9_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 155.0
  • Bit_score: 138
  • Evalue 7.90e-30
Sigma factor, ECF subfamily {ECO:0000313|EMBL:GAD58265.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimon UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 155.0
  • Bit_score: 138
  • Evalue 1.10e-29
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 157.0
  • Bit_score: 122
  • Evalue 9.70e-26

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Taxonomy

Brevundimonas abyssalis → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 468
ATGACCTTCTTCCTGCGCCGGATTAAGGACCGCTCGTTGGCGGAGGATCTGACGCAGGATGTCTTGCTTAAGGTTGTGCGCGCATGCGGGCGCGGGCAGATCGAGCGAGCGGACAGCTACGTCTTCACGGTCGCAACCAATCTCCTGCGAGATCATCGCCGCCGAGCTCTCCGTGCAGGCCACGCCGTCTTCCTACCCATAGAGGAAGACTTCGAGGGTCAGCTCGAAAGTCAGCTGGTGGAGGCAATTTCGCCCGAGCGCGTCTTACTGAGTGAGGAGTTTCTTGCGGATGTGCTGCGTTCCCTGGAGGAACTGAACGAGCTGACCCGCAAGATCTTTATCTTGTTTCGGCTCGAGAATATGAAGCAGAAGGACATTGCTGCCCTGTACGGTATAGGGCAGAGCACCGTCGAGAAGCACGTCGTGAAGGCCGTGGTCCATCTGGCCAAACGGTATGGGCATGAGTGA
PROTEIN sequence
Length: 156
MTFFLRRIKDRSLAEDLTQDVLLKVVRACGRGQIERADSYVFTVATNLLRDHRRRALRAGHAVFLPIEEDFEGQLESQLVEAISPERVLLSEEFLADVLRSLEELNELTRKIFILFRLENMKQKDIAALYGIGQSTVEKHVVKAVVHLAKRYGHE*