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13_1_20cm_3_scaffold_394

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_394_1
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1287
DNA (1287bp) protein (429aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
peptidase n=1 Tax=Nevskia ramosa RepID=UPI0003B612E0
ATP-dependent protease La
13_1_20cm_3_scaffold_394_trna_1
unknown

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1421..1493
DNA (73bp)
transferRNA
13_1_20cm_3_scaffold_394_2
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1527..1733)
DNA (207bp) protein (69aa)
Site-specific recombinase XerD n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C169_DESTA
Site-specific recombinase XerD {ECO:0000313|EMBL:AFM23310.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfom
site-specific recombinase XerD
13_1_20cm_3_scaffold_394_3
unknown

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comp(1902..2219)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_20cm_3_scaffold_394_4
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2293..2760
DNA (468bp) protein (156aa)
Sigma factor, ECF subfamily n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2Z9X9_9CAUL
Sigma factor, ECF subfamily {ECO:0000313|EMBL:GAD58265.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimon
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_3_scaffold_394_5
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2747..3757
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2YS39_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:GAD58266.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas a
anti-FecI sigma factor FecR
13_1_20cm_3_scaffold_394_6
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3913..7083
DNA (3171bp) protein (1057aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288BF78 rbh
argininosuccinate synthase Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
TonB-dependent receptor
13_1_20cm_3_scaffold_394_7
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7232..8782
DNA (1551bp) protein (517aa)
tryptophan halogenase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000287BB08 rbh
tryptophan halogenase Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
tryptophan halogenase
13_1_20cm_3_scaffold_394_8
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8809..9537
DNA (729bp) protein (243aa)
peptidase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002892847
SapC related protein {ECO:0000313|EMBL:EIK46066.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
SapC
13_1_20cm_3_scaffold_394_9
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9558..10283
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289C632
Uncharacterized protein {ECO:0000313|EMBL:GAK33806.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
hypothetical protein
13_1_20cm_3_scaffold_394_10
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10721..11326)
DNA (606bp) protein (202aa)
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
Uncharacterized protein id=1718168 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_1_20cm_3_scaffold_394_11
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11544..11972
DNA (429bp) protein (143aa)
DoxX family protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUM3_SIDLE
DoxX family protein {ECO:0000313|EMBL:ADE12410.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophi
DoxX family protein
13_1_20cm_3_scaffold_394_12
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11916..12368)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KMW0_RHISN
Uncharacterized protein {ECO:0000313|EMBL:ACP21533.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source
hypothetical protein
13_1_20cm_3_scaffold_394_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12743..13297
DNA (555bp) protein (185aa)
Amidohydrolase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MD61_RHOM4
amidohydrolase Tax=RBG_16_Betaproteobacteria_64_18_curated
amidohydrolase
Displaying 14 items

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