ggKbase home page

13_1_20cm_3_scaffold_7118_10

Organism: 13_1_20CM_3_Acidobacteria_58_11

partial RP 15 / 55 MC: 2 BSCG 12 / 51 ASCG 5 / 38
Location: 8261..8623

Top 3 Functional Annotations

Value Algorithm Source
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:CDM66977.1}; EC=2.3.3.13 {ECO:0000313|EMBL:CDM66977.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 117.0
  • Bit_score: 146
  • Evalue 1.90e-32
2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 121.0
  • Bit_score: 119
  • Evalue 6.40e-25
2-isopropylmalate synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 id=5224560 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 121.0
  • Bit_score: 129
  • Evalue 2.20e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 363
GTGCAGCAGGACGAATGGATCTACGATTGGAACGCTGCCACGCCGCCGGCGATTCCTCCGGGCACCCGCGTGTTGATGAATGACGAAACCCTTCGCGACGGTTTGCAGAATCCCTCCGTGGTTGACCCTAGCATCGAAGAAAAGATCGAAATCCTGCATCTGATGGAATCCCTGGGAATCGACTCGGTTAATATCGGTCTTCCCGGCGCCGGGTCCCGGGCCTTTAGGCACACCGAAGTGCTGGCTCGCGAAATCGCCACGCAGCGGATGAAGATCAAACCCAACTGCGCGGCGCGCACTCACGAAAACGACATCCGTCCCATCGTCGAGATCTCGCAGACGGTGGGCATGGCCATCGAAGCG
PROTEIN sequence
Length: 121
VQQDEWIYDWNAATPPAIPPGTRVLMNDETLRDGLQNPSVVDPSIEEKIEILHLMESLGIDSVNIGLPGAGSRAFRHTEVLAREIATQRMKIKPNCAARTHENDIRPIVEISQTVGMAIEA