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13_1_20cm_3_scaffold_7118

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_7118_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1..963)
DNA (963bp) protein (321aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ABF40456.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ABF40456.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Korib
Methylmalonyl-CoA mutase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRP4_KORVE
methylmalonyl-CoA mutase
13_1_20cm_3_scaffold_7118_2
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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comp(1144..3162)
DNA (2019bp) protein (673aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036CC528
outer membrane efflux protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
outer membrane efflux protein
13_1_20cm_3_scaffold_7118_3
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3464..4081
DNA (618bp) protein (206aa)
Orotate phosphoribosyltransferase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GHW6_9FIRM
Orotate phosphoribosyltransferase Tax=S_Thermoanaerobacterales_50_218
orotate phosphoribosyltransferase
13_1_20cm_3_scaffold_7118_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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4103..4915
DNA (813bp) protein (271aa)
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
tRNA pseudouridine synthase A n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F1S9_ACIC5
truA; tRNA pseudouridine synthase A
13_1_20cm_3_scaffold_7118_5
unknown

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4965..5078
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_20cm_3_scaffold_7118_6
unknown

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5078..5215
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_20cm_3_scaffold_7118_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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5284..6309
DNA (1026bp) protein (342aa)
Ste24 endopeptidase (EC:3.4.24.84); K06013 STE24 endopeptidase [EC:3.4.24.84] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Ste24 endopeptidase (EC:3.4.24.84)
peptidase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B6D947
13_1_20cm_3_scaffold_7118_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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6358..7974
DNA (1617bp) protein (539aa)
Succinate-semialdehyde dehydrogenase (NAD(P)+) n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRQ5_KORVE
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (stra
succinate-semialdehyde dehydrogenase (NAD(P)+)
13_1_20cm_3_scaffold_7118_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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7986..8228
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QW1_SOLUE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_3_scaffold_7118_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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8261..8623
DNA (363bp) protein (121aa)
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:CDM66977.1}; EC=2.3.3.13 {ECO:0000313|EMBL:CDM66977.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4;
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 id=5224560 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Displaying 10 items

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