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13_1_20cm_3_scaffold_10177

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_10177_1
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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107..589
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M9J0_METRJ
Phage minor structural protein {ECO:0000313|EMBL:GAN48730.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methyl
hypothetical protein
13_1_20cm_3_scaffold_10177_2
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(705..1055)
DNA (351bp) protein (117aa)
glycosyl hydrolase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034A89D4
Uncharacterized protein {ECO:0000313|EMBL:ACK83330.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
hypothetical protein
13_1_20cm_3_scaffold_10177_3
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1083..1727)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Trichosporon asahii var. asahii (strain CBS 8904) RepID=K1WIW8_TRIAC
Putative collagen like protein {ECO:0000313|EMBL:ETZ98799.1}; TaxID=1299328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 824.
PE-PGRS family protein
13_1_20cm_3_scaffold_10177_4
unknown

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comp(1994..2392)
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_20cm_3_scaffold_10177_5
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2942..3058
DNA (117bp) protein (39aa)
Aminotransferase, class V n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FK87_9RHOB
Aminotransferase, class V {ECO:0000313|EMBL:EDM72805.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp.
13_1_20cm_3_scaffold_10177_6
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3084..3836
DNA (753bp) protein (251aa)
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:BAI76350.1}; EC=4.2.1.80 {ECO:0000313|EMBL:BAI76350.1};; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospi
mhpD; 2-keto-4-pentenoate hydratase (EC:4.2.1.80)
2-keto-4-pentenoate hydratase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P6S1_AZOS1
13_1_20cm_3_scaffold_10177_7
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3889..4233)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JUM6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KGM34150.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limos
hypothetical protein
13_1_20cm_3_scaffold_10177_8
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4440..5081
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U1R9_9PROT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Conserved protein of unknown function
13_1_20cm_3_scaffold_10177_9
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5110..6420
DNA (1311bp) protein (437aa)
Putative pyrrolo-quinoline quinone n=1 Tax=Oceanibaculum indicum P24 RepID=K2KLC6_9PROT rbh
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:EWY40004.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella s
PQQ enzyme repeat family protein
13_1_20cm_3_scaffold_10177_10
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6445..7212
DNA (768bp) protein (256aa)
GTPase Der n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z032_9RHIZ
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobact
engA; GTP-binding protein engA
13_1_20cm_3_scaffold_10177_11
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7173..7712
DNA (540bp) protein (180aa)
GTPase Der n=1 Tax=Oceanibaculum indicum P24 RepID=K2K5R0_9PROT
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobac
der; GTP-binding protein, essential for cell growth
13_1_20cm_3_scaffold_10177_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(7697..8902)
DNA (1206bp) protein (402aa)
Putative Hybrid histidine kinase {ECO:0000313|EMBL:CBK40571.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CBK40571.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" so
putative hybrid histidine kinase (EC:2.7.13.3)
Putative Hybrid histidine kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBG2_9BACT
13_1_20cm_3_scaffold_10177_13

Not on your lists

comp(9020..11908)
DNA (2889bp) protein (963aa)
Sensor protein (Modular protein) {ECO:0000313|EMBL:CBI08407.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CBI08407.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source=
Sensor protein (Modular protein) n=1 Tax=mine drainage metagenome RepID=E6QMD6_9ZZZZ
multi-sensor hybrid histidine kinase
13_1_20cm_3_scaffold_10177_14
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11972..12541)
DNA (570bp) protein (190aa)
Acetyltransferase, GNAT family n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMI5_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:KGM33713.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limos
acetyltransferase, GNAT family
13_1_20cm_3_scaffold_10177_15
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12553..13212)
DNA (660bp) protein (220aa)
Rhodanese-like protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TKQ8_9PROT
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
rhodanese-like protein
13_1_20cm_3_scaffold_10177_16
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13209..13328)
DNA (120bp) protein (40aa)
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolat
13_1_20cm_3_scaffold_10177_17
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13333..14034)
DNA (702bp) protein (234aa)
Threonyl/alanyl tRNA synthetase SAD n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NU57_AZOS1
Threonyl/alanyl tRNA synthetase SAD {ECO:0000313|EMBL:BAI71936.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azo
threonyl/alanyl tRNA synthetase SAD
Displaying 17 items

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