ggKbase home page

13_1_20cm_3_scaffold_13336

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_13336_1
unknown

Not on your lists

comp(2..247)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_20cm_3_scaffold_13336_2
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(470..853)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZDD0_METPB
Uncharacterized protein {ECO:0000313|EMBL:ACB82338.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
hypothetical protein
13_1_20cm_3_scaffold_13336_3
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(850..1587)
DNA (738bp) protein (246aa)
Thiocyanate hydrolase {ECO:0000313|EMBL:ACB82339.1}; EC=3.5.5.8 {ECO:0000313|EMBL:ACB82339.1};; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; M
Thiocyanate hydrolase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZDD1_METPB rbh
thiocyanate hydrolase
13_1_20cm_3_scaffold_13336_4
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1620..1931)
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Methylobacterium RepID=B1ZDD2_METPB
Uncharacterized protein {ECO:0000313|EMBL:ACB82340.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
hypothetical protein
13_1_20cm_3_scaffold_13336_5
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1918..2343)
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Methylobacterium RepID=B1ZDD2_METPB
Uncharacterized protein {ECO:0000313|EMBL:ACB82340.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
hypothetical protein
13_1_20cm_3_scaffold_13336_6
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2444..3607)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F8109 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETR78947.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
putative acyl-CoA dehydrogenase
13_1_20cm_3_scaffold_13336_7
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4302..5012
DNA (711bp) protein (237aa)
Alginate o-acetyltransferase AlgI n=1 Tax=Pseudomonas aeruginosa 39016 RepID=E2ZXU4_PSEAI
Conserved domain protein {ECO:0000313|EMBL:EGF51202.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;
13_1_20cm_3_scaffold_13336_8
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5548..6303
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Gluconacetobacter xylinus (strain NBRC 3288 / BCRC 11682 / LMG 1693) RepID=G2I0X2_GLUXN
Conserved protein {ECO:0000313|EMBL:GAK45729.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
13_1_20cm_3_scaffold_13336_9
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6303..7175
DNA (873bp) protein (291aa)
UPI0003D027DA related cluster n=1 Tax=unknown RepID=UPI0003D027DA
Peptidase P60 {ECO:0000313|EMBL:ESZ26348.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A00
NLP/P60 protein
13_1_20cm_3_scaffold_13336_10
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7114..7980)
DNA (867bp) protein (289aa)
Polysaccharide deacetylase family protein, putative n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMJ7_9PROT
Chitin deacetylase {ECO:0000313|EMBL:KJC54109.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTS
polysaccharide deacetylase family protein 2
13_1_20cm_3_scaffold_13336_11
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7991..9241)
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YS01_9ALTE
Putative uncharacterized protein {ECO:0000313|EMBL:EHJ05001.1}; TaxID=1094979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinob
putative multidrug-efflux transporter
13_1_20cm_3_scaffold_13336_12
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10382..11548
DNA (1167bp) protein (389aa)
copper-translocating P-type ATPase (EC:3.6.3.4)
Haloacid dehalogenase {ECO:0000313|EMBL:AKH18886.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas san
Cation-transporting ATPase id=3551987 bin=GWC2_Proteo_65_14_Ab886 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
13_1_20cm_3_scaffold_13336_13
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11540..13651)
DNA (2112bp) protein (704aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Oceanibaculum indicum P24 RepID=K2J0D8_9PROT rbh
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:EKE76361.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Ocea
13_1_20cm_3_scaffold_13336_14
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13742..14761)
DNA (1020bp) protein (340aa)
RND efflux system, outer membrane lipoprotein,NodT family n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AUZ6_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:AIB15455.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasi
hypothetical protein
13_1_20cm_3_scaffold_13336_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15264..18221)
DNA (2958bp) protein (986aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NT26_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29373.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
acriflavin resistance protein
13_1_20cm_3_scaffold_13336_16
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18507..19538)
DNA (1032bp) protein (344aa)
multidrug transporter n=1 Tax=Burkholderia kururiensis RepID=UPI00034CBAEF
Acriflavin resistance protein {ECO:0000313|EMBL:BAO85897.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia
acriflavin resistance protein
Displaying 16 items

View Taxonomy