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13_1_20cm_3_scaffold_1867

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1867_1
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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1..162
DNA (162bp) protein (54aa)
NTP pyrophosphohydrolase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TK70_9PROT
NTP pyrophosphohydrolase {ECO:0000313|EMBL:EDP66997.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase
13_1_20cm_3_scaffold_1867_2
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(159..998)
DNA (840bp) protein (280aa)
Putative SAM-dependent methyltransferase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z3N7_AZOL4 rbh
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:CBS88016.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source
putative SAM-dependent methyltransferase
13_1_20cm_3_scaffold_1867_3
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1071..1823
DNA (753bp) protein (251aa)
Putative phosphoribosyl transferase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AHX9_AZOBR
Competence protein ComF {ECO:0000313|EMBL:AIB10615.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasi
competence protein ComF
13_1_20cm_3_scaffold_1867_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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1853..3238
DNA (1386bp) protein (462aa)
Hydroxylating alpha subunit of a dioxygenase system n=4 Tax=Bordetella RepID=K0MAJ9_BORPB
Uncharacterized protein {ECO:0000313|EMBL:ETW93531.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hcaE; hydroxylating subunit alpha of a dioxygenase system
13_1_20cm_3_scaffold_1867_5
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3334..3597
DNA (264bp) protein (88aa)
Glutaredoxin 3 n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NQW6_AZOS1
Glutaredoxin {ECO:0000313|EMBL:KJB94862.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC
glrX2; glutaredoxin 3
13_1_20cm_3_scaffold_1867_6
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3631..4422
DNA (792bp) protein (264aa)
Bifunctional nitrilase/cyanide hydratase/apolipoprotein N-acyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J1H9_9PROT
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
13_1_20cm_3_scaffold_1867_7
unknown

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comp(4416..4616)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_20cm_3_scaffold_1867_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4630..4803)
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:KJB96447.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
13_1_20cm_3_scaffold_1867_9
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5063..5353
DNA (291bp) protein (97aa)
molecular chaperone GroES n=1 Tax=Rhizobium meliloti RepID=UPI00038027A7
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1532558 spec
groS5; 10 kDa chaperonin 5
13_1_20cm_3_scaffold_1867_10
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5368..7011
DNA (1644bp) protein (548aa)
60 kDa chaperonin n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NRF5_AZOS1 rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=528244 speci
hspD1; chaperonin GroEL
13_1_20cm_3_scaffold_1867_11
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7073..7549)
DNA (477bp) protein (159aa)
Putative SAM-dependent methyltransferase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z3P1_AZOL4
SAM-dependent methyltransferase {ECO:0000313|EMBL:KJR66144.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospir
putative SAM-dependent methyltransferase
13_1_20cm_3_scaffold_1867_12
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7689..8591
DNA (903bp) protein (301aa)
Protein containing DUF1178 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U2A8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KJB94867.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
hypothetical protein
13_1_20cm_3_scaffold_1867_13
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8976..10196
DNA (1221bp) protein (407aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; O
Aspartokinase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JNW6_9PROT rbh
aspartate kinase
13_1_20cm_3_scaffold_1867_14
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10193..11332
DNA (1140bp) protein (380aa)
fabK; enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HXJ7_9PROT rbh
Enoyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EKV32916.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" sourc
13_1_20cm_3_scaffold_1867_15
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11329..13647
DNA (2319bp) protein (773aa)
ptsP; fused PTS enzyme: PEP-protein phosphotransferase (enzyme I) ; GAF domain containing protein (EC:2.7.3.9)
Signal transduction protein containing GAF and PtsI domains n=1 Tax=Oceanibaculum indicum P24 RepID=K2K412_9PROT rbh
Signal transduction protein containing GAF and PtsI domains {ECO:0000313|EMBL:EKE72150.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oc
13_1_20cm_3_scaffold_1867_16
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13715..14863
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000382AD4D
Outer membrane protein assembly factor YaeT {ECO:0000313|EMBL:KIM00275.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;"
hypothetical protein
13_1_20cm_3_scaffold_1867_17
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(15057..15347)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=uncultured alpha proteobacterium HF0010_13E22 RepID=E0XR17_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIY13918.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
13_1_20cm_3_scaffold_1867_18
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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15659..15991
DNA (333bp) protein (111aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AT29_AZOBR
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
13_1_20cm_3_scaffold_1867_19
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16004..16357)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q7E4_METSZ
Uncharacterized protein {ECO:0000313|EMBL:CCJ06042.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (s
hypothetical protein
13_1_20cm_3_scaffold_1867_20
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16448..16981)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL84_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGM52760.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concret
13_1_20cm_3_scaffold_1867_21
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16986..17996)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003448AA3
hypothetical protein Tax=CG_Rhodof_01
porin
13_1_20cm_3_scaffold_1867_22
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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18284..19513
DNA (1230bp) protein (410aa)
Dolichyl-phosphate beta-D-mannosyltransferase {ECO:0000313|EMBL:EGV20341.1}; EC=2.4.1.83 {ECO:0000313|EMBL:EGV20341.1};; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatial
Dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83)
Dolichyl-phosphate beta-D-mannosyltransferase n=1 Tax=Thiocapsa marina 5811 RepID=F9U5B8_9GAMM rbh
13_1_20cm_3_scaffold_1867_trna_1
unknown

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19639..19711
DNA (73bp)
transferRNA
13_1_20cm_3_scaffold_1867_23
unknown

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19821..19883
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 24 items

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