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13_1_20cm_3_scaffold_42278

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_42278_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..133
DNA (132bp) protein (44aa)
Choline dehydrogenase and related flavoproteins n=1 Tax=uncultured alpha proteobacterium EF100_102A06 RepID=E0Y254_9PROT
glucose-methanol-choline oxidoreductase
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ADV00673.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
13_1_20cm_3_scaffold_42278_2
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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147..1256
DNA (1110bp) protein (370aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A3D6_STAND rbh
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ADH89695.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source
alcohol dehydrogenase zinc-binding domain-containing protein
13_1_20cm_3_scaffold_42278_3
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1753..2490
DNA (738bp) protein (246aa)
amidohydrolase 2 Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Amidohydrolase 2 id=3780588 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
13_1_20cm_3_scaffold_42278_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2646..3044)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EJ05_BRASB
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
13_1_20cm_3_scaffold_42278_5
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3041..3700)
DNA (660bp) protein (220aa)
nthB; Low-molecular weight cobalt-containing nitrile hydratase subunit beta (L-nitrilase) (L-NHase) (EC:4.2.1.84)
Low-molecular weight cobalt-containing nitrile hydratase subunit beta (L-nitrilase) (L-NHase) n=1 Tax=Ralstonia solanacearum RepID=D8NXQ1_RALSL
Nitrile hydratase {ECO:0000313|EMBL:KJK21434.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
13_1_20cm_3_scaffold_42278_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3697..4338)
DNA (642bp) protein (214aa)
cobalt-containing nitrile hydratase subunit alpha n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037E3D6F
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48274.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
nitrile hydratase subunit alpha
13_1_20cm_3_scaffold_42278_7
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4679..5503
DNA (825bp) protein (275aa)
alpha/beta hydrolase n=1 Tax=Afipia birgiae RepID=UPI0002EF287F rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KJC58001.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. L
alpha/beta hydrolase fold protein
13_1_20cm_3_scaffold_42278_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5791..6774
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036E33EE
Uncharacterized protein {ECO:0000313|EMBL:ETX01526.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_20cm_3_scaffold_42278_9
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7069..8604
DNA (1536bp) protein (512aa)
Gamma-glutamyltranspeptidase (EC:2.3.2.2)
Gamma-glutamyltranspeptidase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AFX9_COLFT
Gamma-glutamyltransferase {ECO:0000313|EMBL:KGM33780.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus lim
13_1_20cm_3_scaffold_42278_10
Pseudomonas sp. GM21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8618..9733
DNA (1116bp) protein (372aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Pseudomonas sp. GM21 RepID=J3F0F5_9PSED rbh
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:EJM22657.1}; TaxID=1144325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sour
aspartate aminotransferase
13_1_20cm_3_scaffold_42278_11
unknown

Not on your lists

comp(9740..10216)
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_20cm_3_scaffold_42278_12
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10395..10928)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DF69_PSEFL
Uncharacterized protein {ECO:0000313|EMBL:ERP41555.1}; TaxID=1221522 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluor
hypothetical protein
13_1_20cm_3_scaffold_42278_13
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10967..11389)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI000315B99C
ybiC; malate dehydrogenase Tax=RBG_16_Anaeromyxobacter_69_14_curated
malate/L-lactate dehydrogenase
Displaying 13 items

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