ggKbase home page

13_1_20cm_3_scaffold_4770

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_4770_1
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1028
DNA (1026bp) protein (342aa)
phosphoribosylformylglycinamidine synthase II; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
purL; Phosphoribosylformylglycinamidine synthase II (FGAM synthase II) (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Oceanibaculum indicum P24 RepID=K2IZ62_9PROT
13_1_20cm_3_scaffold_4770_2
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1060..1296
DNA (237bp) protein (79aa)
BolA family protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JMW6_9PROT
ATP-binding protein {ECO:0000313|EMBL:KJV10722.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
BolA family protein
13_1_20cm_3_scaffold_4770_3
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1358..1690
DNA (333bp) protein (111aa)
Glutaredoxin n=1 Tax=Azospirillum amazonense Y2 RepID=G1XZY3_9PROT
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazon
glutaredoxin-like protein
13_1_20cm_3_scaffold_4770_4
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1849..2196
DNA (348bp) protein (116aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhizobium sp. CF080 RepID=J2KHV0_9RHIZ
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EUB99967.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/A
transcription regulator protein
13_1_20cm_3_scaffold_4770_5
unknown

Not on your lists

comp(2222..2407)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_20cm_3_scaffold_4770_6
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2647..3090
DNA (444bp) protein (148aa)
30S ribosomal protein S6 n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SA50_PHAFV
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000313|EMBL:CCQ74428.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magn
rpsF; 30S ribosomal protein S6
13_1_20cm_3_scaffold_4770_7
bacterium YEK0313, Bacteria

Not on your lists


3091..3360
DNA (270bp) protein (90aa)
30S ribosomal protein S18 n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B4F32A
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
protein RpsR
13_1_20cm_3_scaffold_4770_8
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3400..4335
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALL7_AZOBR
Membrane protein {ECO:0000313|EMBL:AIB11621.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;
membrane protein
13_1_20cm_3_scaffold_4770_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4328..4885
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003731B2B
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503, ECO:0000313|EMBL:CCC98128.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azos
rplI; 50S ribosomal protein L9
13_1_20cm_3_scaffold_4770_10
Halomonas sp. KO116, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5077..6123
DNA (1047bp) protein (349aa)
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:AJY52760.1}; EC=2.1.1.79 {ECO:0000313|EMBL:AJY52760.1};; TaxID=1504981 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospi
Cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Uncharacterized protein n=1 Tax=Halomonas sp. PBN3 RepID=U7P9N2_9GAMM rbh
13_1_20cm_3_scaffold_4770_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6242..7756
DNA (1515bp) protein (505aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Replicative DNA helicase, putative n=1 Tax=Azospirillum amazonense Y2 RepID=G1XYD7_9PROT rbh
replicative DNA helicase
13_1_20cm_3_scaffold_4770_12
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7922..9034
DNA (1113bp) protein (371aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirilla
Alanine racemase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TIQ5_PHAFV rbh
alanine racemase
13_1_20cm_3_scaffold_4770_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9031..9807
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SJ82_RHOPH rbh
putative ABC-type transporter permease involved in resistance to organic solvents Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
13_1_20cm_3_scaffold_4770_14
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9804..10730
DNA (927bp) protein (309aa)
ABC transporter, ribonucleotide transport ATP-binding protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y496_9PROT rbh
ABC transporter, ribonucleotide transport ATP-binding protein {ECO:0000313|EMBL:EGX99668.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae;
ABC transporter ATP-binding protein
13_1_20cm_3_scaffold_4770_15
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10769..11881
DNA (1113bp) protein (371aa)
DNA repair protein radA n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6F3_AZOL4
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.
radA; DNA repair protein
13_1_20cm_3_scaffold_4770_16
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11889..12554
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K5Q0_9PROT
Colicin V production protein {ECO:0000313|EMBL:KJB97656.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanell
colicin V production protein
13_1_20cm_3_scaffold_4770_17
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(12700..13185)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XXD5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KIY13601.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
13_1_20cm_3_scaffold_4770_18
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13551..14129
DNA (579bp) protein (193aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
amidophosphoribosyltransferase (EC:2.4.2.14)
amidophosphoribosyltransferase n=1 Tax=Elioraea tepidiphila RepID=UPI0003693BA2
13_1_20cm_3_scaffold_4770_19
Rahnella aquatilis, Rahnella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14168..15049
DNA (882bp) protein (294aa)
Major facilitator superfamily protein n=1 Tax=Rahnella aquatilis HX2 RepID=H8NNZ2_RAHAQ
Major facilitator superfamily protein {ECO:0000313|EMBL:AFE58782.1}; TaxID=1151116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Rahnella.;" source="Ra
major facilitator superfamily protein
Displaying 19 items

View Taxonomy