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13_1_20cm_3_scaffold_2198_8

Organism: 13_1_20CM_3_Alphaproteobacteria_64_12

partial RP 29 / 55 MC: 1 BSCG 28 / 51 ASCG 5 / 38
Location: comp(8285..8785)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor n=1 Tax=Herminiimonas arsenicoxydans RepID=A4GA46_HERAR similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 167.0
  • Bit_score: 200
  • Evalue 1.10e-48
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 166.0
  • Bit_score: 285
  • Evalue 6.00e-74
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 167.0
  • Bit_score: 200
  • Evalue 3.00e-49

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Taxonomy

RLO_Betaproteobacteria_68_19 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGGACGACGCCGAGCGCCTGGTCGAGCTCATCCCGCGGCTACGCCGTTATGCCCGGGCGCTGGTCGGCGATCGCGCGAGTGCCGACGATCTCGTGCAGGACACCTTGGAGCGCGCCTGGACCAAGCTCCATCTATACCGGCAGGGCACCGATCTGCGCGCCTGGCTGTTCACCGTGATGCATAACGTCCATGTCAACCGCGTGCGCGCGACGCGCGTCAGCGACCCGCTCGGCGACGAGATGCCGGAGCTCGCGCAGCGCGGCACGCAGGCCGATGCGCTGCTGGTGCGCGACCTCGACCGCGCCATCGCGCGGCTGCCGGCCGACCAGCGCGCGGTACTGCTCCTGGTGACGCTCGAGGAGATGAGCTACGAAGAGGTCGCGCGCACCCTCGGCATCCCGATCGGTACCGTCATGTCGCGCCTGTCACGCGCGCGCGAAAAGCTGCGCGCGATGATGCTCGGCCAGACGCCGGGAGCGAAGCTTAAGGTGGTGAAGTGA
PROTEIN sequence
Length: 167
MDDAERLVELIPRLRRYARALVGDRASADDLVQDTLERAWTKLHLYRQGTDLRAWLFTVMHNVHVNRVRATRVSDPLGDEMPELAQRGTQADALLVRDLDRAIARLPADQRAVLLLVTLEEMSYEEVARTLGIPIGTVMSRLSRAREKLRAMMLGQTPGAKLKVVK*