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13_1_20cm_3_scaffold_2198

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2198_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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56..2395
DNA (2340bp) protein (780aa)
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
hypothetical protein n=1 Tax=Kushneria aurantia RepID=UPI00036FEAED
13_1_20cm_3_scaffold_2198_2
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

2392..5424
DNA (3033bp) protein (1011aa)
Efflux pump, RND family, inner membrane protein, AcrB/AcrD/AcrF family n=2 Tax=Geobacter sulfurreducens RepID=D7AJ41_GEOSK
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
RND family efflux pump inner membrane protein
13_1_20cm_3_scaffold_2198_3
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5399..6190
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADW5_9PROT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
hypothetical protein
13_1_20cm_3_scaffold_2198_4
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6150..6725
DNA (576bp) protein (192aa)
putative uracil-DNA glycosylase; K03649 TDG/mug DNA glycosylase family protein [EC:3.2.2.-] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
Putative uracil-DNA glycosylase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H1H8_ACTM4
Uracil-DNA glycosylase superfamily
13_1_20cm_3_scaffold_2198_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6749..6943
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FT00_STRMK
Uncharacterized protein {ECO:0000313|EMBL:CAQ46110.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltop
hypothetical protein
13_1_20cm_3_scaffold_2198_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

6924..7526
DNA (603bp) protein (201aa)
isochorismatase (EC:3.3.2.1)
Isochorismatase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GA70_SORC5
Nicotinamidase-like amidase {ECO:0000313|EMBL:CDM66647.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_20cm_3_scaffold_2198_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7512..8288)
DNA (777bp) protein (259aa)
Transmembrane transcriptional regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AHN1_9PROT
transmembrane transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
transmembrane transcriptional regulator
13_1_20cm_3_scaffold_2198_8
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8285..8785)
DNA (501bp) protein (167aa)
Putative RNA polymerase sigma factor n=1 Tax=Herminiimonas arsenicoxydans RepID=A4GA46_HERAR
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
RNA polymerase sigma factor
13_1_20cm_3_scaffold_2198_9
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8819..9673)
DNA (855bp) protein (285aa)
Cytochrome c n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A9H6_ALKEH
diheme cytochrome C-type Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
cytochrome c
13_1_20cm_3_scaffold_2198_10
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9683..10018)
DNA (336bp) protein (112aa)
Cytochrome c class II n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SCP3_GALCS
cytochrome c class II Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
cytochrome c class II
Displaying 10 items

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