ggKbase home page

13_1_20cm_3_scaffold_1892

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1892_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

67..1410
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0003133408
aldehyde dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
aldehyde dehydrogenase family protein
13_1_20cm_3_scaffold_1892_2
unknown

Not on your lists

comp(1428..1925)
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_20cm_3_scaffold_1892_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1940..2875)
DNA (936bp) protein (312aa)
Luciferase-like monooxygenase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EIP0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:ETX06117.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
luciferase-like monooxygenase
13_1_20cm_3_scaffold_1892_4
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

2976..3941
DNA (966bp) protein (322aa)
Pirin domain-containing protein; K06911 Tax=CSP1_4_Chloroflexi
Pirin domain-containing protein; K06911 id=14629020 bin=bin8_Chloro species=Kribbella flavida genus=Kribbella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
pirin
13_1_20cm_3_scaffold_1892_5
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3959..4339)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6L1T5_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST35164.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp
13_1_20cm_3_scaffold_1892_6

Not on your lists

comp(4389..5405)
DNA (1017bp) protein (339aa)
ErfK/YbiS/YcfS/YnhG family protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BJR8_9ZZZZ
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EQD54235.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenom
ErfK/YbiS/YcfS/YnhG family protein
13_1_20cm_3_scaffold_1892_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5770..6240
DNA (471bp) protein (157aa)
LuxR family transcriptional regulator n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B528C9
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABE61880.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrob
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
13_1_20cm_3_scaffold_1892_8
unknown

Not on your lists

6352..6639
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_20cm_3_scaffold_1892_9
unknown

Not on your lists

6768..7301
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_20cm_3_scaffold_1892_10
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7492..7779
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI000378C429
Uncharacterized protein {ECO:0000313|EMBL:AEG94702.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
hypothetical protein
13_1_20cm_3_scaffold_1892_11
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(7822..9186)
DNA (1365bp) protein (455aa)
tryptophan synthase subunit beta; K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RBG_16_Armatimonadetes_67_12_curated
tryptophan synthase subunit beta; K06001 tryptophan synthase beta chain [EC:4.2.1.20] id=14630775 bin=bin9_gal15 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=bin9_gal15 organism_group=GAL15
tryptophan synthase subunit beta
13_1_20cm_3_scaffold_1892_12
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

9220..10332
DNA (1113bp) protein (371aa)
Peptidase M20 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GB43_CHLAD rbh
Peptidase M20 {ECO:0000313|EMBL:ACL26643.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans
peptidase M20
13_1_20cm_3_scaffold_1892_13
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10667..11260
DNA (594bp) protein (198aa)
Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
13_1_20cm_3_scaffold_1892_14
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

11291..12076
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLX1_ROSCS
Uncharacterized protein {ECO:0000313|EMBL:ABU58519.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus cas
hypothetical protein
13_1_20cm_3_scaffold_1892_15
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

12073..13179
DNA (1107bp) protein (369aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_01933}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_01933};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_01933};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rul
O-succinylbenzoate synthase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SF69_9BACT
menC; O-succinylbenzoate synthase
13_1_20cm_3_scaffold_1892_16
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13189..14250)
DNA (1062bp) protein (354aa)
Calcium/proton exchanger Cax n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XSD2_9FIRM
Calcium/proton exchanger Cax {ECO:0000313|EMBL:EHQ87884.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngi
calcium/proton exchanger Cax
Displaying 16 items

View Taxonomy