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13_1_20cm_3_scaffold_2108

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2108_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(2..361)
DNA (360bp) protein (120aa)
TetR-family protein transcriptional regulator n=2 Tax=Mycobacterium smegmatis RepID=A0QQ84_MYCS2
TetR family transcriptional regulator Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
TetR family transcriptional regulator
13_1_20cm_3_scaffold_2108_2
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(606..1232)
DNA (627bp) protein (209aa)
Predicted protein n=1 Tax=Streptomyces sp. C RepID=D9VTR3_9ACTO
TetR family transcriptional regulator {ECO:0000313|EMBL:KJY17840.1}; TaxID=1609135 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL
TetR family transcriptional regulator
13_1_20cm_3_scaffold_2108_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1244..2851)
DNA (1608bp) protein (536aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036034CC rbh
Phytoene dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:AGA29054.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source=
phytoene dehydrogenase-like oxidoreductase
13_1_20cm_3_scaffold_2108_4
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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comp(2848..4038)
DNA (1191bp) protein (397aa)
Rieske 2Fe-2S domain protein n=2 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QQ78_MYCS2
hypothetical protein; K00479 Rieske 2Fe-2S family protein Tax=RBG_16_RIF_CHLX_69_14_curated
Rieske (2Fe-2S) domain-containing protein
13_1_20cm_3_scaffold_2108_5
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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4148..5311
DNA (1164bp) protein (388aa)
acyl-CoA dehydrogenase domain-containing protein Tax=GWC2_RIF_CHLX_73_18_curated
Acyl-CoA dehydrogenase domain-containing protein id=4729354 bin=GWC2_Chloroflexi_73_18 species=Streptomyces violaceusniger genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
acyl-CoA dehydrogenase
13_1_20cm_3_scaffold_2108_6
Thermanaerovibrio acidaminovorans, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

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5559..7340
DNA (1782bp) protein (594aa)
CoA-binding domain protein n=1 Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B6J7_THEAS
CoA-binding domain protein {ECO:0000313|EMBL:ACZ19638.1}; TaxID=525903 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaerovibrio acid
CoA-binding domain-containing protein
13_1_20cm_3_scaffold_2108_7
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7551..9077
DNA (1527bp) protein (509aa)
FAD dependent oxidoreductase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HG29_ANADF
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABS27675.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter
FAD dependent oxidoreductase
13_1_20cm_3_scaffold_2108_8
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(9153..9458)
DNA (306bp) protein (102aa)
Agmatinase {ECO:0000313|EMBL:ADZ08379.1}; EC=3.5.3.11 {ECO:0000313|EMBL:ADZ08379.1};; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobac
agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T7F0_METSL
13_1_20cm_3_scaffold_2108_9
unknown

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comp(10215..10619)
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_20cm_3_scaffold_2108_10

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comp(10757..12109)
DNA (1353bp) protein (451aa)
aminobutyraldehyde dehydrogenase (EC:1.2.1.19)
Aminobutyraldehyde dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F004_CONWI
Aldehyde dehydrogenase family {ECO:0000313|EMBL:AIA11910.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_3_scaffold_2108_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12146..13342)
DNA (1197bp) protein (399aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacterac
alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FET9_CONWI
13_1_20cm_3_scaffold_2108_12
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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comp(13339..14448)
DNA (1110bp) protein (370aa)
saccharopine dehydrogenase Tax=RBG_16_KB1_OP1_55_9_curated
Saccharopine dehydrogenase id=3526264 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
saccharopine dehydrogenase
13_1_20cm_3_scaffold_2108_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(14558..16120)
DNA (1563bp) protein (521aa)
Transcriptional regulator, PucR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FET8_CONWI
Transcriptional regulator, PucR family {ECO:0000313|EMBL:ADB49762.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="C
PucR family transcriptional regulator
13_1_20cm_3_scaffold_2108_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16120..17556)
DNA (1437bp) protein (479aa)
Aminotransferase class-III n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FET7_CONWI
Aminotransferase class-III {ECO:0000313|EMBL:ADB49761.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter
class III aminotransferase
Displaying 14 items

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