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13_1_20cm_3_scaffold_2136

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2136_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2..2758
DNA (2757bp) protein (919aa)
CpaF n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L013_THERP
type ii secretion system integral membrane subunit; K12510 tight adherence protein B Tax=RBG_16_Actinobacteria_68_12_curated
protein CpaF
13_1_20cm_3_scaffold_2136_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2987..3592
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI00037BD05B
type II secretion system protein; K12511 tight adherence protein C Tax=RBG_16_Actinobacteria_68_12_curated
type II secretion system protein
13_1_20cm_3_scaffold_2136_3
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3589..4248
DNA (660bp) protein (220aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LIC3_SYNFM
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:ABK17175.1}; Flags: Precursor;; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacter
isoprenylcysteine carboxyl methyltransferase
13_1_20cm_3_scaffold_2136_4
Thermobaculum terrenum, Thermobaculum, Bacteria

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4245..5390
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCR9_THET1
Uncharacterized protein {ECO:0000313|EMBL:ACZ42584.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
hypothetical protein
13_1_20cm_3_scaffold_2136_5
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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5387..7366
DNA (1980bp) protein (660aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromono
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W0M8_9ACTO
ftsH; ATP-dependent metalloprotease FtsH
13_1_20cm_3_scaffold_2136_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

7560..8174
DNA (615bp) protein (205aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QBC2_CATAD
two component LuxR family transcriptional regulator Tax=RBG_16_Actinobacteria_68_12_curated
LuxR family transcriptional regulator
13_1_20cm_3_scaffold_2136_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8171..9553)
DNA (1383bp) protein (461aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XNJ5_9CORY
Multi-sensor signal transduction histidine kinase Tax=RBG_16_Actinobacteria_68_12_curated
putative signal transduction histidine kinase
13_1_20cm_3_scaffold_2136_8
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9865..10383
DNA (519bp) protein (173aa)
Uncharacterized protein {ECO:0000313|EMBL:EWT05669.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5
13_1_20cm_3_scaffold_2136_9
unknown

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comp(10186..10746)
DNA (561bp) protein (187aa)

This feature has no annotations

13_1_20cm_3_scaffold_2136_10
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11859..14159
DNA (2301bp) protein (767aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U7W1_METS4 rbh
Uncharacterized protein {ECO:0000313|EMBL:EWT05669.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5
hypothetical protein
13_1_20cm_3_scaffold_2136_11
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14576..16210)
DNA (1635bp) protein (545aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI000380511E
LuxR-family transcriptional regulator {ECO:0000313|EMBL:EWM18992.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
LuxR family transcriptional regulator
Displaying 11 items

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