ggKbase home page

13_1_20cm_3_scaffold_257

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_257_1
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

2..673
DNA (672bp) protein (224aa)
Cytochrome c class I n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M193_ACIFD
Menaquinol-cytochrome c reductase cytochrome c subunit {ECO:0000313|EMBL:KJF18015.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;
cytochrome c class I
13_1_20cm_3_scaffold_257_2
Propionibacterium sp. KPL1852, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

676..1680
DNA (1005bp) protein (335aa)
Tat (Twin-arginine translocation) pathway signal sequence n=3 Tax=Propionibacterium RepID=U1GE78_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ERS66099.1}; TaxID=1203576 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
Tat (twin-arginine translocation) pathway signal sequence
13_1_20cm_3_scaffold_257_3
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1677..3044
DNA (1368bp) protein (456aa)
Cytochrome b/b6 domain protein n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M191_ACIFD
Cytochrome b/b6 domain protein {ECO:0000313|EMBL:ACU54739.1}; Flags: Precursor;; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;"
cytochrome b/b6 domain-containing protein
13_1_20cm_3_scaffold_257_4
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3045..4946)
DNA (1902bp) protein (634aa)
Glycoside hydrolase 15-related n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASF9_RUBXD
Glycoside hydrolase 15-related {ECO:0000313|EMBL:ABG05669.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source=
glycoside hydrolase 15-like protein
13_1_20cm_3_scaffold_257_5
unknown

Not on your lists

comp(4999..5187)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_20cm_3_scaffold_257_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5309..5686)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4D4_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB50506.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_3_scaffold_257_7
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5769..6194)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI0003645EF4
Uncharacterized protein {ECO:0000313|EMBL:EWM18844.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
13_1_20cm_3_scaffold_257_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6252..7001)
DNA (750bp) protein (250aa)
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZ99_CONWI
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily {ECO:0000313|EMBL:ADB51864.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibact
sigma-B/F/G subfamily RNA polymerase sigma-28 factor
13_1_20cm_3_scaffold_257_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7333..7704)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4D4_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB50506.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_3_scaffold_257_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7789..8505
DNA (717bp) protein (239aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8Y2_CONWI
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ADB52977.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.
Crp/Fnr family transcriptional regulator
13_1_20cm_3_scaffold_257_11
unknown

Not on your lists

comp(8548..8886)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_20cm_3_scaffold_257_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(8935..9786)
DNA (852bp) protein (284aa)
alpha/beta hydrolase n=1 Tax=Patulibacter americanus RepID=UPI0003B6171A
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADB51889.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexi
alpha/beta hydrolase fold protein
13_1_20cm_3_scaffold_257_13
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9811..10281)
DNA (471bp) protein (157aa)
Peroxiredoxin {ECO:0000313|EMBL:BAN02299.1}; EC=1.11.1.15 {ECO:0000313|EMBL:BAN02299.1};; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatob
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A188_9ACTN
13_1_20cm_3_scaffold_257_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10286..10759)
DNA (474bp) protein (158aa)
Peptidyl-prolyl cis-trans isomerase cyclophilin type n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEW8_CONWI
Peptidyl-prolyl cis-trans isomerase cyclophilin type {ECO:0000313|EMBL:ADB51685.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacte
cyclophilin type peptidyl-prolyl cis-trans isomerase
13_1_20cm_3_scaffold_257_15
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

11114..11716
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EEN4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF83146.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
type 11 methyltransferase
13_1_20cm_3_scaffold_257_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11728..12609
DNA (882bp) protein (294aa)
Diacylglycerol kinase catalytic region n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEX0_CONWI rbh
Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:ADB51687.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="C
diacylglycerol kinase
13_1_20cm_3_scaffold_257_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

12606..13994
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEX1_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB51688.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_3_scaffold_257_18
unknown

Not on your lists

14398..14622
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_20cm_3_scaffold_257_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14622..15359
DNA (738bp) protein (246aa)
CobB/CobQ domain protein glutamine amidotransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEX3_CONWI
CobB/CobQ domain protein glutamine amidotransferase {ECO:0000313|EMBL:ADB51690.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter
CobB/CobQ domain-containing protein glutamine amidotransferase
13_1_20cm_3_scaffold_257_20
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

15794..15982
DNA (189bp) protein (63aa)
hypothetical protein Tax=RBG_13_Actinobacteria_63_9_curated
cbdbA1599; hypothetical protein id=1241662 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
13_1_20cm_3_scaffold_257_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16084..16515)
DNA (432bp) protein (144aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|SAAS:SAAS00071038}; EC=3.6.1.23 {ECO:0000256|SAAS:SAAS00071036};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirub
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE62_CONWI
13_1_20cm_3_scaffold_257_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16537..17886)
DNA (1350bp) protein (450aa)
GTPase HflX n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE61_CONWI
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexib
GTP-binding proten HflX
13_1_20cm_3_scaffold_257_23
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

17979..18971
DNA (993bp) protein (331aa)
NAD-dependent epimerase/dehydratase; K00091 dihydroflavonol-4-reductase [EC:1.1.1.219] Tax=RBG_16_RIF_CHLX_70_13_curated
NAD-dependent epimerase/dehydratase n=1 Tax=uncultured prokaryote RepID=H5SKS3_9ZZZZ
NAD-dependent epimerase/dehydratase
13_1_20cm_3_scaffold_257_24
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18987..20351)
DNA (1365bp) protein (455aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces
glutamate decarboxylase n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000363E9ED
gadB1; glutamate decarboxylase
13_1_20cm_3_scaffold_257_25
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

20503..20760
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYS5_RUBXD
Uncharacterized protein {ECO:0000313|EMBL:ABG03453.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrob
hypothetical protein
Displaying 25 items

View Taxonomy