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13_1_20cm_3_scaffold_2771

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2771_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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199..1914
DNA (1716bp) protein (572aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5U1_CONWI rbh
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ADB52640.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="
glucose-methanol-choline oxidoreductase
13_1_20cm_3_scaffold_2771_2
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1927..2532)
DNA (606bp) protein (202aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae;
Superoxide dismutase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CD95_9PLAN
superoxide dismutase
13_1_20cm_3_scaffold_2771_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2581..3513)
DNA (933bp) protein (311aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F6N4_CONWI
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADB50801.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibac
NAD-dependent epimerase/dehydratase
13_1_20cm_3_scaffold_2771_trna_1
unknown

Not on your lists

comp(4226..4299)
DNA (74bp)
transferRNA
13_1_20cm_3_scaffold_2771_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4449..4886)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2P2_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB54173.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_3_scaffold_2771_5
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5053..5346)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B7860F
Uncharacterized protein {ECO:0000313|EMBL:EHN11131.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
13_1_20cm_3_scaffold_2771_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

5517..5699
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYU4_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB49818.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_3_scaffold_2771_7
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5784..7499
DNA (1716bp) protein (572aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000375B2CD
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABW68809.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="D
AMP-dependent synthetase and ligase
13_1_20cm_3_scaffold_2771_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7511..8812)
DNA (1302bp) protein (434aa)
Patatin n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYU0_CONWI
Patatin {ECO:0000313|EMBL:ADB49814.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM
patatin
13_1_20cm_3_scaffold_2771_9
Prevotella histicola, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8857..10119
DNA (1263bp) protein (421aa)
dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (EC:3.4.16.4)
hypothetical protein n=1 Tax=Brevibacterium sp. JC43 RepID=UPI0002F94EDC
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:KGF27454.1}; TaxID=1236504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella histicol
13_1_20cm_3_scaffold_2771_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10116..12134)
DNA (2019bp) protein (673aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=469383 species="Bacteria
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYS5_CONWI
13_1_20cm_3_scaffold_2771_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12131..12955)
DNA (825bp) protein (275aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=469383 spec
stationary-phase survival protein SurE (EC:3.1.3.5)
5'-nucleotidase SurE n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYS4_CONWI
13_1_20cm_3_scaffold_2771_12
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12997..13506
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000373DDD1
Uncharacterized protein {ECO:0000313|EMBL:CEA00916.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1
hypothetical protein
13_1_20cm_3_scaffold_2771_13
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13518..14606
DNA (1089bp) protein (363aa)
Thioesterase superfamily protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M8W0_METRJ
Thioesterase superfamily protein {ECO:0000313|EMBL:ACB27935.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methy
thioesterase superfamily protein
13_1_20cm_3_scaffold_2771_14

Not on your lists

comp(14638..15423)
DNA (786bp) protein (262aa)
tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYS3_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKK53420.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_3_scaffold_2771_15
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


comp(15448..15801)
DNA (354bp) protein (118aa)
50S ribosomal protein L17 n=1 Tax=Patulibacter americanus RepID=UPI0003B77E83
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Pa
50S ribosomal protein L17
13_1_20cm_3_scaffold_2771_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15821..16786)
DNA (966bp) protein (322aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYS1_CONWI
DNA-directed RNA polymerase subunit alpha
13_1_20cm_3_scaffold_2771_17
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(16827..17447)
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0BZP8_9BACL
ribosomal protein S4, bacterial/organelle type Tax=RBG_16_Actinobacteria_64_13_curated
ribosomal protein S4, bacterial/organelle type
13_1_20cm_3_scaffold_2771_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


comp(17456..17863)
DNA (408bp) protein (136aa)
30S ribosomal protein S11 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYS0_CONWI
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RBG_16_Actinobacteria_68_12_curated
30S ribosomal protein S11
13_1_20cm_3_scaffold_2771_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


comp(17874..18257)
DNA (384bp) protein (128aa)
30S ribosomal protein S13 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYR9_CONWI
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
30S ribosomal protein S13
13_1_20cm_3_scaffold_2771_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18616..21408)
DNA (2793bp) protein (931aa)
Penicillin amidase {ECO:0000313|EMBL:ADB50279.1}; EC=3.5.1.11 {ECO:0000313|EMBL:ADB50279.1};; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; C
Penicillin amidase (EC:3.5.1.11)
Penicillin amidase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2A4_CONWI
13_1_20cm_3_scaffold_2771_21
Bifidobacterium psychraerophilum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21429..21929)
DNA (501bp) protein (167aa)
Rubrerythrin n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RR05_9PROT
Rubrerythrin {ECO:0000313|EMBL:KFI81096.1}; TaxID=218140 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium psychraerophilum.;"
hypothetical protein
13_1_20cm_3_scaffold_2771_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

22022..22447
DNA (426bp) protein (142aa)
Ferric uptake regulator, Fur family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEX9_CONWI
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:ADB51696.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Cone
Fur family ferric uptake regulator
13_1_20cm_3_scaffold_2771_23

Not on your lists

comp(22467..23750)
DNA (1284bp) protein (428aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYR7_CONWI
methionine aminopeptidase
13_1_20cm_3_scaffold_2771_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23782..23982)
DNA (201bp) protein (67aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYR6_CONWI
adenylate kinase
Displaying 25 items

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