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13_1_20cm_3_scaffold_280

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_280_1
unknown

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comp(2..187)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_20cm_3_scaffold_280_2
Nonomuraea longicatena, Nonomuraea, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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244..1881
DNA (1638bp) protein (546aa)
Amino acid/metabolite permease n=1 Tax=Nonomuraea longicatena RepID=C9W357_9ACTO rbh
Amino acid/metabolite permease {ECO:0000313|EMBL:ACN29726.1}; TaxID=83682 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Nonomuraea.;" source="Nonomuraea longicatena.;"
amino acid permease-associated protein
13_1_20cm_3_scaffold_280_3
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1929..3275
DNA (1347bp) protein (449aa)
Glutamate--ammonia ligase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3R6_THERP
Glutamine synthetase {ECO:0000313|EMBL:KDS88158.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseof
glutamate--ammonia ligase
13_1_20cm_3_scaffold_280_4
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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3369..4016
DNA (648bp) protein (216aa)
Peptidase C26 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AR78_RUBXD
Peptidase C26 {ECO:0000313|EMBL:ABG06100.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xyla
peptidase C26
13_1_20cm_3_scaffold_280_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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4013..5377
DNA (1365bp) protein (455aa)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:ABG06099.1}; EC=1.2.1.8 {ECO:0000313|EMBL:ABG06099.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterinea
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AR79_RUBXD rbh
13_1_20cm_3_scaffold_280_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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5377..6138
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AR80_RUBXD
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABG06098.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;
short chain dehydrogenase
13_1_20cm_3_scaffold_280_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(6114..6836)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00034DD1BA
glxB2; glutamine amidotransferase GlxB Tax=RBG_16_Actinobacteria_68_12_curated
SCF55.27; amino transferase
13_1_20cm_3_scaffold_280_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(6842..7624)
DNA (783bp) protein (261aa)
Alpha-acetolactate decarboxylase {ECO:0000313|EMBL:ADB48642.1}; EC=4.1.1.5 {ECO:0000313|EMBL:ADB48642.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexib
alpha-acetolactate decarboxylase (EC:4.1.1.5)
Alpha-acetolactate decarboxylase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F564_CONWI
13_1_20cm_3_scaffold_280_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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7880..8152
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E102_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN12641.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
transglycosylase-associated protein
13_1_20cm_3_scaffold_280_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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8373..8573
DNA (201bp) protein (67aa)
Cold-shock DNA-binding domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA31_CONWI
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADB53126.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Co
cold-shock protein
13_1_20cm_3_scaffold_280_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

8788..9216
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4D4_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB50506.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_3_scaffold_280_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9237..10361)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F289_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB50264.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_3_scaffold_280_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10426..13986
DNA (3561bp) protein (1187aa)
aldehyde dehydrogenase (EC:1.2.1.3)
Aldehyde dehydrogenase (NAD(+)) n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCR4_CONWI rbh
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter wo
13_1_20cm_3_scaffold_280_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13902..14771)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EBU4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN08846.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
hypothetical protein
13_1_20cm_3_scaffold_280_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14829..15647
DNA (819bp) protein (273aa)
Alpha/beta hydrolase fold protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4W0_CONWI
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADB48538.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexi
putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
13_1_20cm_3_scaffold_280_16
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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15741..18158
DNA (2418bp) protein (806aa)
Drug exporter of the RND superfamily-like protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A4M8_THECD rbh
Drug exporter of the RND superfamily-like protein {ECO:0000313|EMBL:ACY96263.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Th
drug exporter of the RND superfamily-like protein rbh
13_1_20cm_3_scaffold_280_17
unknown

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comp(18155..18769)
DNA (615bp) protein (205aa)

This feature has no annotations

13_1_20cm_3_scaffold_280_18
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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18818..20959
DNA (2142bp) protein (714aa)
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:ABU57870.1}; EC=3.5.2.9 {ECO:0000313|EMBL:ABU57870.1};; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Ro
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NK50_ROSCS rbh
13_1_20cm_3_scaffold_280_19
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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20969..23317
DNA (2349bp) protein (783aa)
Acetone carboxylase, alpha subunit n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UV21_ROSS1
Hydantoinase B/oxoprolinase {ECO:0000313|EMBL:ELY37705.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA
hydantoinase B/oxoprolinase
13_1_20cm_3_scaffold_280_20
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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23272..23625
DNA (354bp) protein (118aa)
Acetone carboxylase gamma subunit n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WSV9_KYRT2
Acetone carboxylase gamma subunit {ECO:0000313|EMBL:ADG07128.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM
acetone carboxylase subunit gamma
13_1_20cm_3_scaffold_280_21

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23665..23985
DNA (321bp) protein (107aa)
Protein belonging to Uncharacterized protein family UPF0145 n=1 Tax=mine drainage metagenome RepID=T1B896_9ZZZZ
Protein belonging to Uncharacterized protein family UPF0145 {ECO:0000313|EMBL:EQD49244.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage me
hypothetical protein
13_1_20cm_3_scaffold_280_22
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(23982..24875)
DNA (894bp) protein (298aa)
Putative phospholipase glycoprotein n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9Z5N9_STRSW
Uncharacterized protein {ECO:0000313|EMBL:AHH94579.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein
13_1_20cm_3_scaffold_280_trna_1
unknown

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25142..25225
DNA (84bp)
transferRNA
13_1_20cm_3_scaffold_280_trna_2
unknown

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25287..25359
DNA (73bp)
transferRNA
13_1_20cm_3_scaffold_280_23
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(25567..25812)
DNA (246bp) protein (82aa)
Chromate transporter, chromate ion transporter (CHR) family n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LEE3_SYNFM
Chromate transporter, chromate ion transporter (CHR) family {ECO:0000313|EMBL:ABK15795.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteracea
Displaying 25 items

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