ggKbase home page

13_1_20cm_3_scaffold_450

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_450_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

1..672
DNA (672bp) protein (224aa)
Siroheme synthase {ECO:0000313|EMBL:ADB54270.1}; EC=1.3.1.76 {ECO:0000313|EMBL:ADB54270.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Co
siroheme synthase (EC:1.3.1.76)
Siroheme synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Y9_CONWI
13_1_20cm_3_scaffold_450_2
unknown

Not on your lists

comp(780..1187)
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_20cm_3_scaffold_450_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1193..2032)
DNA (840bp) protein (280aa)
hemolysin III n=1 Tax=Patulibacter americanus RepID=UPI0003B7799F
Putative membrane protein hemolysin III {ECO:0000313|EMBL:EHN09552.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source=
hemolysin III family channel protein
13_1_20cm_3_scaffold_450_4
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2224..2649
DNA (426bp) protein (142aa)
Transcriptional repressor NrdR n=2 Tax=Bacteria RepID=B7APY1_9FIRM
Transcriptional repressor NrdR {ECO:0000255|HAMAP-Rule:MF_00440}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofu
nrdR; transcriptional regulator NrdR
13_1_20cm_3_scaffold_450_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

2649..5471
DNA (2823bp) protein (941aa)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:ADB53831.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ADB53831.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleoph
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZJ3_CONWI rbh
13_1_20cm_3_scaffold_450_6
Gordonia alkanivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5572..5922
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Gordonia alkanivorans NBRC 16433 RepID=F9VVL3_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAA12642.1}; TaxID=1027371 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia alkanivorans NBRC 16433.;
hypothetical protein
13_1_20cm_3_scaffold_450_7
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5958..6941)
DNA (984bp) protein (328aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYD8_RUBXD
Lactate dehydrogenase and related dehydrogenase {ECO:0000313|EMBL:AHY47510.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrob
Lactate dehydrogenase and related dehydrogenase
13_1_20cm_3_scaffold_450_8
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6934..7770)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YNS2_NOCFA rbh
Uncharacterized protein {ECO:0000313|EMBL:BAD60169.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
hypothetical protein
13_1_20cm_3_scaffold_450_9
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7890..8303
DNA (414bp) protein (138aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
methionine-R-sulfoxide reductase (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E729_METEZ
13_1_20cm_3_scaffold_450_10
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(8323..9507)
DNA (1185bp) protein (395aa)
Seryl-tRNA synthetase {ECO:0000313|EMBL:EHN12607.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EHN12607.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteracea
seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase n=1 Tax=Patulibacter medicamentivorans RepID=H0E132_9ACTN
13_1_20cm_3_scaffold_450_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9619..10026)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDK3_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB49577.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sourc
hypothetical protein
13_1_20cm_3_scaffold_450_12
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10112..10600
DNA (489bp) protein (163aa)
NADH-FMN oxidoreductase n=1 Tax=Patulibacter medicamentivorans RepID=H0E137_9ACTN
NADH-FMN oxidoreductase {ECO:0000313|EMBL:EHN12612.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
oxidoreductase
13_1_20cm_3_scaffold_450_13

Not on your lists

comp(10779..11204)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDK5_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKL60824.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_3_scaffold_450_14

Not on your lists

11351..11713
DNA (363bp) protein (121aa)
NADH-quinone oxidoreductase subunit A n=1 Tax=Patulibacter medicamentivorans RepID=H0E139_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KKL60823.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NADH-ubiquinone/plastoquinone oxidoreductase chain 3
13_1_20cm_3_scaffold_450_15

Not on your lists

11710..12441
DNA (732bp) protein (244aa)
NADH-quinone oxidoreductase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase, B subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDK7_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKL60822.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_3_scaffold_450_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

12441..12971
DNA (531bp) protein (177aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit
NADH-quinone oxidoreductase subunit C n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDK8_CONWI
NADH (or F420H2) dehydrogenase subunit C
13_1_20cm_3_scaffold_450_17
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

12968..14233
DNA (1266bp) protein (422aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
NADH dehydrogenase I subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D n=1 Tax=Patulibacter medicamentivorans RepID=H0E142_9ACTN
13_1_20cm_3_scaffold_450_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14230..14982
DNA (753bp) protein (251aa)
NADH dehydrogenase (Ubiquinone) 24 kDa subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDL0_CONWI
NADH dehydrogenase (Ubiquinone) 24 kDa subunit {ECO:0000313|EMBL:ADB49584.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" s
NADH dehydrogenase (ubiquinone) 24 kDa subunit
13_1_20cm_3_scaffold_450_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14982..16346
DNA (1365bp) protein (455aa)
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:ADB49585.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ADB49585.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibact
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase (Quinone) n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDL1_CONWI
13_1_20cm_3_scaffold_450_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16343..18469
DNA (2127bp) protein (709aa)
NADH-quinone oxidoreductase, chain G n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDL2_CONWI
NADH-quinone oxidoreductase, chain G {ECO:0000313|EMBL:ADB49586.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Con
NADH-quinone oxidoreductase subunit G
Displaying 20 items

View Taxonomy