ggKbase home page

13_1_20cm_3_scaffold_722

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_722_1
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..479)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI0003781CF6
Glycosyl transferase, family 2 {ECO:0000313|EMBL:CAD84096.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomo
glycosyl transferase family 2 protein
13_1_20cm_3_scaffold_722_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(499..2655)
DNA (2157bp) protein (719aa)
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:ADB51606.1}; EC=2.7.6.5 {ECO:0000313|EMBL:ADB51606.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexib
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDZ0_CONWI rbh
13_1_20cm_3_scaffold_722_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2877..5294)
DNA (2418bp) protein (806aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY9_CONWI rbh
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:ADB51605.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" so
single-stranded-DNA-specific exonuclease RecJ
13_1_20cm_3_scaffold_722_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5580..5849)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY7_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB51603.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_3_scaffold_722_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5866..8772)
DNA (2907bp) protein (969aa)
Protein-export membrane protein SecD n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY6_CONWI rbh
Protein-export membrane protein SecD {ECO:0000313|EMBL:ADB51602.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexiba
protein-export membrane protein SecD
13_1_20cm_3_scaffold_722_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9276..10352)
DNA (1077bp) protein (359aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; So
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY4_CONWI
Holliday junction DNA helicase RuvB
13_1_20cm_3_scaffold_722_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10349..10951)
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY3_CONWI
Holliday junction DNA helicase RuvA
13_1_20cm_3_scaffold_722_8
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10948..11508)
DNA (561bp) protein (187aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Holliday junction resolvase n=1 Tax=Patulibacter americanus RepID=UPI0003B372B6
13_1_20cm_3_scaffold_722_9
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11626..12600)
DNA (975bp) protein (325aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0IS55_MYCSM
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:AGB21051.1}; Flags: Precursor;; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
13_1_20cm_3_scaffold_722_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12700..13449)
DNA (750bp) protein (250aa)
Probable transcriptional regulatory protein Cwoe_3178 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY1_CONWI
Probable transcriptional regulatory protein Cwoe_3178 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexi
hypothetical protein
13_1_20cm_3_scaffold_722_11
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(13637..14740)
DNA (1104bp) protein (368aa)
aminopeptidase (EC:3.4.11.-); K01269 aminopeptidase [EC:3.4.11.-] Tax=RBG_13_Chloroflexi_53_26_curated
tro:trd_A0613 peptidase M29 aminopeptidase II; K01269 aminopeptidase [EC:3.4.11.-] id=1241468 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
peptidase M29 aminopeptidase II
13_1_20cm_3_scaffold_722_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(14737..15315)
DNA (579bp) protein (193aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase g
Glutamine amidotransferase subunit PdxT n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDW4_CONWI
SNO glutamine amidotransferase
13_1_20cm_3_scaffold_722_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15378..16265)
DNA (888bp) protein (296aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDW3_CONWI
pyridoxine biosynthesis protein
13_1_20cm_3_scaffold_722_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16342..17253)
DNA (912bp) protein (304aa)
Transcriptional regulator, RpiR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDW1_CONWI
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:ADB51577.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="C
RpiR family transcriptional regulator
13_1_20cm_3_scaffold_722_15
unknown

Not on your lists

17342..17785
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_20cm_3_scaffold_722_16
unknown

Not on your lists

comp(17797..18393)
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_20cm_3_scaffold_722_17
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18431..19039
DNA (609bp) protein (203aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9V738_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJK33064.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Noc
membrane protein
Displaying 17 items

View Taxonomy