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13_1_20cm_3_scaffold_768

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_768_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

21..2315
DNA (2295bp) protein (765aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=266117 species="Bacteria; Actinobact
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUL7_RUBXD rbh
13_1_20cm_3_scaffold_768_2
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

2390..3007
DNA (618bp) protein (206aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=697281 species="Bacteria; Firmicutes; Clostrid
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZXS4_MAHA5
13_1_20cm_3_scaffold_768_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3004..4170
DNA (1167bp) protein (389aa)
DNA polymerase III, delta prime subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZI3_CONWI
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:ADB53821.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="
DNA polymerase III delta prime subunit
13_1_20cm_3_scaffold_768_4
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

4180..5919
DNA (1740bp) protein (580aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrob
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
Multi-sensor signal transduction histidine kinase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZ23_RUBXD
13_1_20cm_3_scaffold_768_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

5925..6635
DNA (711bp) protein (237aa)
XRE family transcriptional regulator n=1 Tax=Promicromonospora sukumoe RepID=UPI00035E1EDE
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABG03354.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacte
two component transcriptional regulator
13_1_20cm_3_scaffold_768_trna_3
unknown

Not on your lists

comp(6650..6723)
DNA (74bp)
transferRNA
13_1_20cm_3_scaffold_768_6
Nocardia cyriacigeorgica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6819..7208
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI00037D1238
Uncharacterized protein {ECO:0000313|EMBL:CCF65835.1}; TaxID=1127134 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia cyriacigeorgica (strain GUH-2).;"
hypothetical protein
13_1_20cm_3_scaffold_768_7
Corynebacterium marinum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7252..8313
DNA (1062bp) protein (354aa)
Glycosyl transferase family 2 n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F7M7_VERMA
Uncharacterized protein {ECO:0000313|EMBL:AJK67897.1}; TaxID=1224162 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium marinum DSM 44
hypothetical protein
13_1_20cm_3_scaffold_768_8
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8256..8741)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBC7_ANADF
Uncharacterized protein {ECO:0000313|EMBL:ABS26023.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
hypothetical protein
13_1_20cm_3_scaffold_768_9
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8738..9541)
DNA (804bp) protein (268aa)
family 2 glycosyl transferase Tax=RBG_16_Deltaproteobacteria_49_23_curated
Glycosyl transferase id=1871133 bin=GWB2_Proteobacteria_55_19 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
family 2 glycosyl transferase
13_1_20cm_3_scaffold_768_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(9745..10272)
DNA (528bp) protein (176aa)
Acyl-CoA hydrolase n=1 Tax=Desulfovibrio sp. U5L RepID=I2PXM9_9DELT
hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
hypothetical protein
13_1_20cm_3_scaffold_768_11
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10660..10899
DNA (240bp) protein (80aa)
Uracil-DNA glycosylase superfamily protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XU71_9ACTO
Uracil-DNA glycosylase superfamily protein {ECO:0000313|EMBL:EON22922.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp.
uracil-DNA glycosylase superfamily
13_1_20cm_3_scaffold_768_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10980..11555
DNA (576bp) protein (192aa)
CDP-diacylglycerol/glycerol-3-phosphate3-phosphatidyl transferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFI0_CONWI
CDP-diacylglycerol/glycerol-3-phosphate3-phosphatidyl transferase {ECO:0000313|EMBL:ADB53773.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase
13_1_20cm_3_scaffold_768_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11571..12629)
DNA (1059bp) protein (353aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexi
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFH9_CONWI
hypothetical protein
13_1_20cm_3_scaffold_768_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

12814..13998
DNA (1185bp) protein (395aa)
RNA polymerase sigma factor SigA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFH8_CONWI
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Con
RpoD subfamily RNA polymerase sigma-70 subunit
13_1_20cm_3_scaffold_768_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(14032..14541)
DNA (510bp) protein (170aa)
Alpha/beta hydrolase fold protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FER5_CONWI
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADB49739.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexi
alpha/beta hydrolase fold protein
13_1_20cm_3_scaffold_768_16
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14532..14918)
DNA (387bp) protein (129aa)
Alpha/beta hydrolase fold protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FER5_CONWI
alpha/beta hydrolase fold protein Tax=RBG_13_Deltaproteobacteria_65_10_curated
alpha/beta hydrolase fold protein
13_1_20cm_3_scaffold_768_17
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14968..15240)
DNA (273bp) protein (91aa)
Flavin-containing monooxygenase FMO n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6ER38_AMYSD
Flavin-containing monooxygenase FMO {ECO:0000313|EMBL:AEF40725.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subfl
13_1_20cm_3_scaffold_768_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15237..17102)
DNA (1866bp) protein (622aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FB49_CONWI rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB53241.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein rbh
13_1_20cm_3_scaffold_768_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17165..18004
DNA (840bp) protein (280aa)
Transcriptional regulator, MerR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA68_CONWI
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ADB53163.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="C
MerR family transcriptional regulator
13_1_20cm_3_scaffold_768_trna_2
unknown

Not on your lists

comp(18038..18119)
DNA (82bp)
transferRNA
13_1_20cm_3_scaffold_768_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18393..18836)
DNA (444bp) protein (148aa)
AsnC family transcriptional regulator n=1 Tax=Patulibacter americanus RepID=UPI0003B63F11
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADB53975.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="C
AsnC family transcriptional regulator
13_1_20cm_3_scaffold_768_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18910..21012
DNA (2103bp) protein (701aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0P0_CONWI rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB53974.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_3_scaffold_768_22
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21036..21746
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI0003821FD3
Short-chain dehydrogenase {ECO:0000313|EMBL:KJK57934.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
oxidoreductase
13_1_20cm_3_scaffold_768_23
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21743..22789
DNA (1047bp) protein (349aa)
threonine aldolase n=1 Tax=Streptomyces vitaminophilus RepID=UPI0003756859
Threonine aldolase {ECO:0000313|EMBL:KJK57933.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
ltaE; Low specificity L-threonine aldolase
13_1_20cm_3_scaffold_768_24

Not on your lists

22789..23211
DNA (423bp) protein (141aa)
ketosteroid isomerase n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A85EC
Uncharacterized protein {ECO:0000313|EMBL:KKL55915.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_3_scaffold_768_trna_1
unknown

Not on your lists

23242..23314
DNA (73bp)
transferRNA
13_1_20cm_3_scaffold_768_25
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

23466..24299
DNA (834bp) protein (278aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D872_SINAD
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGA25417.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisph
methylase
13_1_20cm_3_scaffold_768_26
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24412..25554
DNA (1143bp) protein (381aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WK04_ACTMD
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACU38217.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_3_scaffold_768_27
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


25687..25851
DNA (165bp) protein (55aa)
50S ribosomal protein L33 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FES5_CONWI
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
50S ribosomal protein L33
Displaying items 1-30 of 32 in total

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