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13_1_20cm_3_scaffold_8471

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_8471_1

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comp(1..2685)
DNA (2685bp) protein (895aa)
capsular exopolysaccharide family protein (EC:2.7.10.2)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B55E4C
Uncharacterized protein {ECO:0000313|EMBL:KKM06321.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_3_scaffold_8471_2
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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2700..3863
DNA (1164bp) protein (388aa)
Glycosyl transferase group 1 n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B0G1_FRADG
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEH09710.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
group 1 glycosyl transferase
13_1_20cm_3_scaffold_8471_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3884..4552)
DNA (669bp) protein (223aa)
Sortase family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3S8_CONWI
Sortase family protein {ECO:0000313|EMBL:ADB54303.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source
sortase family protein
13_1_20cm_3_scaffold_8471_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5207..5995
DNA (789bp) protein (263aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0G7_CONWI
13_1_20cm_3_scaffold_8471_5
unknown

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5995..6147
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_20cm_3_scaffold_8471_6
uncultured Frankia sp., Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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6427..7473
DNA (1047bp) protein (349aa)
Membrane protein related to metalloendopeptidase n=1 Tax=Patulibacter medicamentivorans RepID=H0EBQ3_9ACTN
CAZy families GH23 protein {ECO:0000313|EMBL:AIA84255.1}; TaxID=181582 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia; environmental samples.;" source="uncultured Frankia sp.;"
peptidase M23
13_1_20cm_3_scaffold_8471_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(7923..8897)
DNA (975bp) protein (325aa)
Metal dependent phosphohydrolase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2W9_CONWI
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ADB54250.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexib
metal dependent phosphohydrolase
13_1_20cm_3_scaffold_8471_8
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

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comp(9288..9494)
DNA (207bp) protein (69aa)
Transcriptional regulator, MerR family n=1 Tax=Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703) RepID=F0RLU0_DEIPM
DNA binding domain-containing protein Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
13_1_20cm_3_scaffold_8471_9
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9710..10975
DNA (1266bp) protein (422aa)
Protein serine/threonine phosphatase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SB42_INTC7
Protein serine/threonine phosphatase {ECO:0000313|EMBL:ADU47303.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Int
protein serine/threonine phosphatase
13_1_20cm_3_scaffold_8471_10
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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10972..11334
DNA (363bp) protein (121aa)
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL
anti-sigma-factor antagonist id=24505191 bin=RBG_19FT_COMBO_GAL15_69_19 species=Terracoccus sp. 273MFTsu3.1 genus=Terracoccus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
anti-anti-sigma factor
13_1_20cm_3_scaffold_8471_11
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(11331..12254)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI000363A652
Transcriptional regulator, luxR family {ECO:0000313|EMBL:EID55904.1}; Flags: Precursor;; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" sou
LuxR family transcriptional regulator
13_1_20cm_3_scaffold_8471_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12858..14309
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A0715
Undecaprenyl-phosphate galactosephosphotransferase {ECO:0000313|EMBL:EIL91351.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter
sthA; glycosyltransferase
13_1_20cm_3_scaffold_8471_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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14302..14946
DNA (645bp) protein (215aa)
Transcriptional regulator, Fis family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022Z3_SOLUE
Transcriptional regulator, Fis family {ECO:0000313|EMBL:ABJ83953.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soli
Fis family transcriptional regulator
13_1_20cm_3_scaffold_8471_14
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(14983..15810)
DNA (828bp) protein (276aa)
O-antigen polymerase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUM9_RUBXD
O-antigen polymerase {ECO:0000313|EMBL:ABG04899.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobact
O-antigen polymerase
13_1_20cm_3_scaffold_8471_15
unknown

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15970..16104
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_20cm_3_scaffold_8471_16
unknown

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16425..16631
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_20cm_3_scaffold_8471_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(16877..17809)
DNA (933bp) protein (311aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFC8_CONWI
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADB53721.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Cone
NAD-dependent epimerase/dehydratase
13_1_20cm_3_scaffold_8471_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(17969..18403)
DNA (435bp) protein (145aa)
Putative phosphohistidine phosphatase, SixA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FC45_CONWI
Putative phosphohistidine phosphatase, SixA {ECO:0000313|EMBL:ADB53340.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sour
phosphohistidine phosphatase, SixA
13_1_20cm_3_scaffold_8471_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18475..22050
DNA (3576bp) protein (1192aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexiba
DNA polymerase III, alpha subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0G3_CONWI
DNA polymerase III subunit alpha
13_1_20cm_3_scaffold_8471_20
unknown

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22125..22490
DNA (366bp) protein (122aa)

This feature has no annotations

Displaying 20 items

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