ggKbase home page

13_1_20cm_3_scaffold_2260_15

Organism: 13_1_20CM_3_Actinobacteria_68_9

near complete RP 43 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 9 / 38
Location: comp(10982..11974)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8G6_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 325.0
  • Bit_score: 432
  • Evalue 3.30e-118
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:KJK45954.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieri UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 324.0
  • Bit_score: 438
  • Evalue 6.50e-120
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 325.0
  • Bit_score: 432
  • Evalue 9.30e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lechevalieria aerocolonigenes → Lechevalieria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGGACCGCATCCGCCGCGATCGCACGCTTGCGGCGAAGGCCCGCCTGCTCGATTCGCCGGACGGCGTGGAGGACGATGTGGACGAGACGACGATCCCGGATGAGCGGCTCGAGCTCGTCTTCACGTGTTGCCACCCGGCACTGGCGCTCGATGCCCAGGTCGCGCTCACGCTGCGGACGCTGGGCGGGCTGACGACACCGGAGATCGCCCGCGCCTTCCTCGTCCCCGAAGCGACGATGGCCAAGCGGCTCGTCCGCGCGAAGCGCAAGATCAAGGCCGCCGGAATCCCGTTTCGCGTGCCCCCGGCTCATCTGCTTCCCGATCGCCTCGCCGCGGTGCTGGCGGTCGCCTACCTGATCTTCAACGAGGGCTACGGCGGCCGTGGAGACCTCGCGGCCGAGGCGATCAGGCTCGGGCGCGCCCTCGCCGAGCTGATGCCCGACGAGCCTGAGGTGCACGGATTGCTGGCGCTGATGCTGATGAACGACGCCCGCCGCGACGCGCGATTCGCCGACGGCATGGTGGTCCTGCTCCGCGATCAGGATCGATCGCTCTGGGATCAAGGCCAACTCGTGGAGGGGCGCGCCGCACTTGGTCGCGCGCAGGCCCTCGGCGGCCGCGGTCCCTACGCGCTGCAGGCGGCGATCGCGGCGCTGCACACGGATGAGCCCCAGGACTGGCCGCAGATCGCGGCCCTCTACGGCGAGGTCGGCCGCCTCACCGGCTCGTCGGTCGTCGAGCTCAACCGAGCCGCGGCAATCGCCGAAGCGGGCGATGTCGAGGCCGCGCTCGCCCTGGTGGAGCGCCTCGACCTCGACAACTACCACTACCTACACGCGACGCGCGCGGAGCTGCTGCGCCGGCTCGATCAAACTGACGAAGCCCGGAAGGCCTACGACCGCGCCTTGGAGCTCGTCCACTCGGACGCCGAGCGCCGCTTCCTCGAGCGGCGGCTGGCCGAGCTGCCTGGCGCGAAGAGCCGGCTGGGCTAG
PROTEIN sequence
Length: 331
MDRIRRDRTLAAKARLLDSPDGVEDDVDETTIPDERLELVFTCCHPALALDAQVALTLRTLGGLTTPEIARAFLVPEATMAKRLVRAKRKIKAAGIPFRVPPAHLLPDRLAAVLAVAYLIFNEGYGGRGDLAAEAIRLGRALAELMPDEPEVHGLLALMLMNDARRDARFADGMVVLLRDQDRSLWDQGQLVEGRAALGRAQALGGRGPYALQAAIAALHTDEPQDWPQIAALYGEVGRLTGSSVVELNRAAAIAEAGDVEAALALVERLDLDNYHYLHATRAELLRRLDQTDEARKAYDRALELVHSDAERRFLERRLAELPGAKSRLG*