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13_1_20cm_3_scaffold_2260

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_2260_1
unknown

Not on your lists

comp(1..786)
DNA (786bp) protein (262aa)

This feature has no annotations

13_1_20cm_3_scaffold_2260_2

Not on your lists

940..1914
DNA (975bp) protein (325aa)
Nitrilase {ECO:0000313|EMBL:AAR97401.1}; EC=3.5.5.7 {ECO:0000313|EMBL:AAR97401.1};; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Nitrilase n=1 Tax=uncultured organism RepID=Q6RWP8_9ZZZZ
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
13_1_20cm_3_scaffold_2260_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1960..3546
DNA (1587bp) protein (529aa)
Thymidylate synthase complementing protein ThyX n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDK1_CONWI
Thymidylate synthase complementing protein ThyX {ECO:0000313|EMBL:ADB49575.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;"
thymidylate synthase complementing protein ThyX
13_1_20cm_3_scaffold_2260_4
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3685..4479
DNA (795bp) protein (265aa)
Blue (Type 1) copper domain protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J582_FRASU
Plastocyanin {ECO:0000313|EMBL:KJE19623.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
blue (type 1) copper domain-containing protein
13_1_20cm_3_scaffold_2260_5
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4472..4966)
DNA (495bp) protein (165aa)
Intracellular protease, PfpI family n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GZ93_9GAMM
Intracellular protease, PfpI family {ECO:0000313|EMBL:AGA90629.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflav
Pfpi family intracellular protease
13_1_20cm_3_scaffold_2260_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(4977..5471)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BB92_9GAMM
YbaK/prolyl-tRNA synthetase associated domain-containing protein Tax=RBG_16_Actinobacteria_67_10_curated
YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein
13_1_20cm_3_scaffold_2260_7
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(5547..6290)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B73A0A
Uncharacterized protein {ECO:0000313|EMBL:EHN12701.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
13_1_20cm_3_scaffold_2260_8
unknown

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comp(6558..6785)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_20cm_3_scaffold_2260_9
Planomicrobium glaciei, Planomicrobium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6795..7241)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00036F8102
Uncharacterized protein {ECO:0000313|EMBL:ETP67513.1}; TaxID=1273538 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planomicrobium.;" source="Planomicrobium glaciei CHR43.;"
putative signal-transduction protein with CBS domains
13_1_20cm_3_scaffold_2260_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7326..8438
DNA (1113bp) protein (371aa)
Saccharopine dehydrogenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDJ2_CONWI rbh
Saccharopine dehydrogenase {ECO:0000313|EMBL:ADB49566.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter
saccharopine dehydrogenase
13_1_20cm_3_scaffold_2260_11
unknown

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8435..9061
DNA (627bp) protein (209aa)

This feature has no annotations

13_1_20cm_3_scaffold_2260_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9058..9843)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDJ3_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB49567.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_3_scaffold_2260_13
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9857..10663)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Rhodococcus RepID=UPI00036FFA9B
Putative short chain dehydrogenase {ECO:0000313|EMBL:KJV03760.1}; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
short-chain dehydrogenase of unknown substrate specificity
13_1_20cm_3_scaffold_2260_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10707..10985
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDJ4_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB49568.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_3_scaffold_2260_15
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10982..11974)
DNA (993bp) protein (331aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8G6_CONWI
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:KJK45954.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieri
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_3_scaffold_2260_16
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12169..12528)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HF34_ACTM4
Uncharacterized protein {ECO:0000313|EMBL:BAL91621.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain
hypothetical protein
13_1_20cm_3_scaffold_2260_17
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12696..13307
DNA (612bp) protein (204aa)
ArsR family transcriptional regulator n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI0003635784
Putative ArsR family transcriptional regulator {ECO:0000313|EMBL:GAB15168.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globi
ArsR family transcriptional regulator
Displaying 17 items

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