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13_1_20cm_3_scaffold_1135

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_1135_1
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..1502)
DNA (1500bp) protein (500aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA18_CATAD rbh
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:ACU70416.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" sour
LPXTG-motif cell wall anchor domain-containing protein rbh
13_1_20cm_3_scaffold_1135_2
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1756..2589
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA19_CATAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU70417.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein rbh
13_1_20cm_3_scaffold_1135_3
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2605..3252)
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA20_CATAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU70418.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein rbh
13_1_20cm_3_scaffold_1135_4
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3360..4190)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 155 RepID=UPI000380F678 rbh
ZIP family zinc transporter {ECO:0000313|EMBL:EWM18832.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
putative divalent heavy-metal cations transporter
13_1_20cm_3_scaffold_1135_5
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4360..4644)
DNA (285bp) protein (95aa)
Transcriptional regulator, TetR family n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA21_CATAD
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACU70419.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidip
TetR family transcriptional regulator
13_1_20cm_3_scaffold_1135_6
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5017..6039
DNA (1023bp) protein (341aa)
Alpha/beta hydrolase fold protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA22_CATAD rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ACU70420.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila
alpha/beta hydrolase fold protein rbh
13_1_20cm_3_scaffold_1135_7
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6204..6443)
DNA (240bp) protein (80aa)
LuxR family transcriptional regulator fused with ATPase domain n=3 Tax=Amycolatopsis mediterranei RepID=I7E458_AMYMS
Regulatory protein, LuxR {ECO:0000313|EMBL:EWC63670.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospong
LuxR family transcriptional regulator fused with ATPase domain
13_1_20cm_3_scaffold_1135_8
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6549..8798)
DNA (2250bp) protein (750aa)
hypothetical protein n=1 Tax=Streptomyces bottropensis RepID=UPI00037E21BC
Putative regulator {ECO:0000313|EMBL:CBG73366.1}; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Stre
regulator
13_1_20cm_3_scaffold_1135_9
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8762..9214)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI000369A163
Uncharacterized protein {ECO:0000313|EMBL:KJY30692.1}; Flags: Fragment;; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp.
protein kinase
13_1_20cm_3_scaffold_1135_10
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9267..11519)
DNA (2253bp) protein (751aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA24_CATAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU70422.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein rbh
13_1_20cm_3_scaffold_1135_11
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11655..12491)
DNA (837bp) protein (279aa)
XRE family transcriptional regulator n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA25_CATAD rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:ACU70423.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphi
XRE family transcriptional regulator rbh
13_1_20cm_3_scaffold_1135_12
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12801..13379
DNA (579bp) protein (193aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA26_CATAD rbh
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ACU70424.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora
anti-sigma regulatory factor, serine/threonine protein kinase rbh
13_1_20cm_3_scaffold_1135_13
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13700..13939
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA27_CATAD
Uncharacterized protein {ECO:0000313|EMBL:ACU70425.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein
13_1_20cm_3_scaffold_1135_14
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14203..15774
DNA (1572bp) protein (524aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA29_CATAD rbh
guaA; GMP synthase rbh
13_1_20cm_3_scaffold_1135_15
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15827..16162)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA30_CATAD
Uncharacterized protein {ECO:0000313|EMBL:ACU70428.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DS
hypothetical protein
13_1_20cm_3_scaffold_1135_16
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16792..17844)
DNA (1053bp) protein (351aa)
NLP/P60 protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA31_CATAD rbh
NLP/P60 protein {ECO:0000313|EMBL:ACU70429.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila
NLP/P60 protein rbh
13_1_20cm_3_scaffold_1135_17
unknown

Not on your lists

18423..18569
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_20cm_3_scaffold_1135_18
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18727..19635)
DNA (909bp) protein (303aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA32_CATAD rbh
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:ACU70430.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora ac
exonuclease RNase T and DNA polymerase III rbh
13_1_20cm_3_scaffold_1135_19
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


19798..21354
DNA (1557bp) protein (519aa)
Signal recognition particle protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA33_CATAD rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulis
signal recognition particle protein rbh
13_1_20cm_3_scaffold_1135_20
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


21888..22349
DNA (462bp) protein (154aa)
30S ribosomal protein S16 n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA35_CATAD
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (str
30S ribosomal protein S16
13_1_20cm_3_scaffold_1135_21
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22352..22591
DNA (240bp) protein (80aa)
UPF0109 protein Caci_1513 n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA36_CATAD
UPF0109 protein Caci_1513 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (str
hypothetical protein
13_1_20cm_3_scaffold_1135_22
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22588..23190
DNA (603bp) protein (201aa)
Ribosome maturation factor RimM n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA37_CATAD rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;"
rimM; 16S rRNA-processing protein RimM rbh
13_1_20cm_3_scaffold_1135_23
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23209..24027
DNA (819bp) protein (273aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31) rbh
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA38_CATAD rbh
13_1_20cm_3_scaffold_1135_24
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


24184..24543
DNA (360bp) protein (120aa)
50S ribosomal protein L19 n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA39_CATAD
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source
50S ribosomal protein L19
13_1_20cm_3_scaffold_1135_25
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24734..25519
DNA (786bp) protein (262aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporacea
Signal peptidase I n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA40_CATAD
signal peptidase I
13_1_20cm_3_scaffold_1135_26
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25556..26680
DNA (1125bp) protein (375aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;"
Signal peptidase I n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QA41_CATAD rbh
signal peptidase I rbh
Displaying 26 items

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